prot_H-elongata_contig10743.614.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10743.614.1
Unique Nameprot_H-elongata_contig10743.614.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length803
Homology
BLAST of mRNA_H-elongata_contig10743.614.1 vs. uniprot
Match: A0A6H5JB63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB63_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 1.170e-152
Identity = 354/796 (44.47%), Postives = 443/796 (55.65%), Query Frame = 0
Query:    1 FQGVSSRVEGVSSRMSARAKGMLSSIGDDE---GGSGSGGDHGSTSKTVAANGKGG--------------HG--------PAVDEEEVARLASVLAESAQLAEKVVAMKSMSTILGNDAEKAPQNVLRSAAGPLSTVLREAEHFDPFFANACIACVLQISEAQEEAFIKELVETGAAEALIPLLHPRFELVRIQGLALLEGLLEVEREAVCSRVVGVPTGMQALVDLLDDRWDEVRHEAVCLIAEFLAGAPGIPPPVDLQNFVAFQEGFEKLFNAAT--EPSEQVSLRALEALRGTLVNNPLSQKLFISGGHLSRLPPLLCPLPPAEEVSDPSSGNTQQPQQQQPATVASRRRWGXXXXXXXENGDALFPPSPASGATVPXXXXXXXXXQLTAP-----------------------------GGAARTR--EREAPVARIRAALLLLLALMG----------------GHGGDSRGVVLG------EAAKAGDSVRGSVGKEGGLMEAVCELALAASRAPVSGGPTWAEYGVPEECQRLAASVLAALISSQSDNQALFARCSIRGAPIVVTLHGRKRLIYATEPRGAVDGLLELWLAAS------LDAPEERNLSCEDAVADTSAEVRKATKKWRKSLDDILDAFLVDNKAWCLAALTAVSSMHASASRRGDGNRR----NDDGDDSKSGGSIFDRRHSGGVG----VSGAGILSLIVRRGLLEPR--SARSMPSADNGRSEGRRRGGSVPGGGKEDRDEDADDPTEASLSLELFRRVLQAGGPDARALAAGISI 700
            F+GVSSRVEGVSSRMS RAK MLSS+ DD     GS S   +GS S    +NG  G              +G        PAVDE EV+RL + +  + QLAEK+VAM  +S +LG+ A +A Q+ L S A  L  +LR+AE+FDPFFANACIAC  Q+ EAQ EAF  E+V  GAA+AL+PLL P+FEL+RI+GLA LE LL  ER  VCS++VGVPTGMQALVDLLDDRWDEVRH+ V L+A FL    G+PPPV+LQNFVAF++GF+KLF AA   E S   SL+AL A+ G L +NPLS+KLF++GGHL RLP LL  L P +    P       P         SRRRWG       E       PS A G    XXXXXXXXX                                  GG         + P+ RIRAAL L+ AL+G                   GD +G+  G       AA AG+ V  +VG+E GL+EAVCELALA+  AP  GGPTW+EYG+P +CQR A  VLA L++    NQ+  +RC +RGAP+ VTLHG+K+L+ ++EPR  VD LLELWLAAS        A             +T+A+           LD  LDAFL  N  WC + L  V++ HASA+R GD ++        G+ S +         + G      V G  ++S + + GLL  R  SA +  S+  G +E         GGG ED      DP  A+L L L RRVLQAGG DARA+AA + +
Sbjct:   37 FKGVSSRVEGVSSRMSLRAKDMLSSVADDHDNYNGSSSPHSNGSASGAARSNGTLGLFNNGSSSSASGILNGIADEVPAVPAVDEAEVSRLVASMDSTTQLAEKMVAMNKLSNVLGDGAGQASQSALCSVAEVLVALLRDAEYFDPFFANACIACAQQLLEAQGEAFAAEMVNAGAAQALLPLLDPKFELIRIEGLACLEALLVAERAKVCSQIVGVPTGMQALVDLLDDRWDEVRHQTVSLLAAFLTEQGGVPPPVNLQNFVAFEDGFDKLFKAADAGEISGDFSLKALAAVSGALTDNPLSRKLFLAGGHLPRLPALLSILRPGDVAEHPLVP----PXXXXXXXXXSRRRWGWGRDKAQE-------PSVARGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGDVEEGGWSGQVPIPRIRAALSLVSALVGCGRQVGVTVSEEAPMVAAAGDKQGLSAGLGATASTAAVAGNEVLSAVGREEGLLEAVCELALASPLAPAGGGPTWSEYGLPADCQRSAMEVLAVLVARHPANQSCLSRCQVRGAPMSVTLHGQKQLV-SSEPRNVVDALLELWLAASSAMEDGATAAAXXXXXXXXXXXETAADNEINATAEVALLDRTLDAFLYGNTEWCKSVLAGVAAKHASAARIGDASQSVPPPASTGNPSSASRGNDHVPVANGTSKEQDVGGVAVMSTVAKIGLLCVRASSAGAPRSSTRGETE-------ADGGGGED------DPLAAALRLRLLRRVLQAGGADARAIAASVGL 807          
BLAST of mRNA_H-elongata_contig10743.614.1 vs. uniprot
Match: D8LC55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC55_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.800e-53
Identity = 128/234 (54.70%), Postives = 152/234 (64.96%), Query Frame = 0
Query:    1 FQGVSSRVEGVSSRMSARAKGMLSSIGDDE----------------GGSGSGGDHG------STSKTVAANGKGGHGPAV------DEEEVARLASVLAESAQLAEKVVAMKSMSTILGNDAEKAPQNVLRSAAGPLSTVLREAEHFDPFFANACIACVLQISEAQEEAFIKELVETGAAEALIPLLHPRFELVRIQGLALLEGLLEVEREAVCSRVVGVPTGMQALVDLLDDR 206
            F+GVSSRVEGVSSRMS RAK MLSS+ DD                 G + S G  G      S+S +   NG     PA       DE EV+RL + +  + QLAEK+VAM  +S +LG+DA +A Q  L S A  L  +LR+AE FDPFFANACIAC  Q+ EAQ EAF  E+V  GAA+ALIPLL P+FEL+RI+GLA LE LL  ER  VCS++VGVPTGMQALVDLLDDR
Sbjct:   37 FKGVSSRVEGVSSRMSLRAKDMLSSVADDHDNNNVSSSPHSNGSAAGAARSNGTLGLFNNGNSSSASGILNGIADEVPAXXXXXXXDEAEVSRLVASMDSTTQLAEKMVAMNKLSNVLGDDAGQASQMALCSVAEALVAMLRDAEFFDPFFANACIACAQQLLEAQGEAFAAEMVNAGAAQALIPLLDPKFELIRIEGLACLEALLVAERAKVCSQIVGVPTGMQALVDLLDDR 270          
BLAST of mRNA_H-elongata_contig10743.614.1 vs. uniprot
Match: D8LC54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC54_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.810e-35
Identity = 137/416 (32.93%), Postives = 176/416 (42.31%), Query Frame = 0
Query:  398 GGDSRGVVLG------EAAKAGDSVRGSVGKEGGLMEAVCELALAASRAPVSGGPTWAEYGVPEECQRLAASVLAALISSQSDNQALFARCSIRGAPIVVTLHGRKRLIYATEPRGAVDGLLELWLAASLDAPEERNLSCEDAVADTSAEVRKATKKWRKSLDDILDAFLVDNKAWCLAALTAVSSMHASASRRGDGNRRNDDGDDSKSGGSIFDRRHSGGVG--------VSGAGILSLIVRRGLLEPR--SARSMPSADNGRSEGRRRGGSVPGGGKEDRDEDADDPTEASLSLELFRRVLQAGGPDARALAAGISIAIEGAGRREKAMAEKKSDISAARGYPGDDGRADLYLDDSGAPIAQAREGGDAFWGGGSRSLGEEGGGGFENGRRIRCGPPLIPALEVAVRLLADGYN 797
            GGD  G+  G       AA AGD V  +VG+E GL+EAVCELALA+  AP  GGPTW+EYG+P +CQR A  VLA L++    NQ                                                                            LD  LDAFL  N  WC + L  V++ HASA+R  D +R +     + +  S+        V         V G  ++S + + GLL  R  SA +  S+  G +E         GGG ED      DP  A+L L L RRVLQAGG DARA+AA + +    A  R      ++S    + G     G           PI + + GG             +G G   +GRR+RCGPPL PALEVA+RLLADGY 
Sbjct:    9 GGDKYGLSAGVGATASTAAAAGDEVLSAVGREEGLLEAVCELALASPLAPAGGGPTWSEYGLPADCQRSAMEVLAVLVARHPANQVAL-------------------------------------------------------------------------LDRTLDAFLSGNTEWCKSVLAGVAAKHASAARLEDASRSSSPPASTGNPSSVPRSNDHVSVANGTSKERDVGGVAVMSTVAKIGLLCVRASSAAAPQSSKPGETEAN-------GGGGED------DPLAAALRLRLLRRVLQAGGADARAIAASVGLPTGAAAVRRGGERARESSEGESNGREEPSGVE--------GPIEEQQRGGXXXXXXXXXXXASDGNGEGGSGRRVRCGPPLTPALEVAMRLLADGYK 330          
BLAST of mRNA_H-elongata_contig10743.614.1 vs. uniprot
Match: A0A2R5GIW3_9STRA (General vesicular transport factor p115 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIW3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.410e-6
Identity = 46/141 (32.62%), Postives = 66/141 (46.81%), Query Frame = 0
Query:  153 EALIPLLHPRFELVRIQGLALLEGLLEVEREAVCSRVVGVPTGMQALVDLLDDRWDEVRHEAVCLIAEFLAGAPGIPPPVDLQNFVAFQEGFEKLFNAAT----EPSEQVSLRALEALRGTLVNNPLSQKLFISGGHLSRL 289
            E+L+  L    +  R+  + LL  L       +   V   P GMQ LVD+LD   + VR+E + L+               LQNFVAF++GF KLF          ++ + +  L  +   L  NPL+QKLF   G +SRL
Sbjct:  153 ESLLEALVSPEQWTRLATIQLLTTLRNNRPSQMEKSVETTPAGMQRLVDVLDANEEVVRNEMLLLLRSLTENNE------QLQNFVAFRDGFAKLFQIIEIEQQYDNDMIVVDCLTIMNWVLRGNPLTQKLFAQSGLVSRL 287          
BLAST of mRNA_H-elongata_contig10743.614.1 vs. uniprot
Match: A0A3P8BGI2_HELPZ (Uso1_p115_head domain-containing protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A3P8BGI2_HELPZ)

HSP 1 Score: 57.8 bits (138), Expect = 8.610e-5
Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 0
Query:  166 VRIQGLALLEGLLEVEREAVCSRVVGVPTGMQALVDLLDDRWDEVRHEAVCLIAEFLAGAPGIPPPVDLQNFVAFQEGFEKLFNAA-TEPSEQVSLR-ALEALRGTLVNNPLSQKLFISGGHLSRLPPLLCPLPPAEEVSDPSSG 308
            VR  G+ LL  LL      V S V+  PTG+  LVD++ DR + VR+EAV ++ E       I      Q  +A++  F  L +   TEP + + +   L  +   L  N ++Q+LF     ++RL  +L  L    E  +P SG
Sbjct:  132 VRRVGIQLLTSLLRHRGPEVQSAVMAQPTGVPHLVDIVHDRREVVRNEAVLMLCELSRSNSQI------QQLLAYENAFVHLLDIIDTEPLDSIIIEDCLFVILNLLRKNAMNQQLFRENNLITRLGVMLTTLLYGSEEDEPDSG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10743.614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JB63_9PHAE1.170e-15244.47Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LC55_ECTSI1.800e-5354.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LC54_ECTSI2.810e-3532.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5GIW3_9STRA8.410e-632.62General vesicular transport factor p115 n=1 Tax=Ho... [more]
A0A3P8BGI2_HELPZ8.610e-531.72Uso1_p115_head domain-containing protein n=1 Tax=H... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 59..322
e-value: 1.7E-20
score: 75.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 76..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10743contigH-elongata_contig10743:2761..8727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10743.614.1mRNA_H-elongata_contig10743.614.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10743 2761..8727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10743.614.1 ID=prot_H-elongata_contig10743.614.1|Name=mRNA_H-elongata_contig10743.614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=803bp
FQGVSSRVEGVSSRMSARAKGMLSSIGDDEGGSGSGGDHGSTSKTVAANG
KGGHGPAVDEEEVARLASVLAESAQLAEKVVAMKSMSTILGNDAEKAPQN
VLRSAAGPLSTVLREAEHFDPFFANACIACVLQISEAQEEAFIKELVETG
AAEALIPLLHPRFELVRIQGLALLEGLLEVEREAVCSRVVGVPTGMQALV
DLLDDRWDEVRHEAVCLIAEFLAGAPGIPPPVDLQNFVAFQEGFEKLFNA
ATEPSEQVSLRALEALRGTLVNNPLSQKLFISGGHLSRLPPLLCPLPPAE
EVSDPSSGNTQQPQQQQPATVASRRRWGWGDGDGDENGDALFPPSPASGA
TVPPAPTSSSSSQLTAPGGAARTREREAPVARIRAALLLLLALMGGHGGD
SRGVVLGEAAKAGDSVRGSVGKEGGLMEAVCELALAASRAPVSGGPTWAE
YGVPEECQRLAASVLAALISSQSDNQALFARCSIRGAPIVVTLHGRKRLI
YATEPRGAVDGLLELWLAASLDAPEERNLSCEDAVADTSAEVRKATKKWR
KSLDDILDAFLVDNKAWCLAALTAVSSMHASASRRGDGNRRNDDGDDSKS
GGSIFDRRHSGGVGVSGAGILSLIVRRGLLEPRSARSMPSADNGRSEGRR
RGGSVPGGGKEDRDEDADDPTEASLSLELFRRVLQAGGPDARALAAGISI
AIEGAGRREKAMAEKKSDISAARGYPGDDGRADLYLDDSGAPIAQAREGG
DAFWGGGSRSLGEEGGGGFENGRRIRCGPPLIPALEVAVRLLADGYNVVV
MLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold