prot_H-elongata_contig107414.611.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107414.611.1
Unique Nameprot_H-elongata_contig107414.611.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A6H5KV09_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV09_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 2.780e-56
Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 0
Query:    1 MDSILATIHYGGTYPDNLFAGCKQS---SGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAVVPEAEPFLGLPVCLPG 134
            MD+IL TIHYGG +P NL AGC  S   +G+D+S D+HV+A+EW ++EM WYVDDQLFC RT W+S +     Y+APFDAEFE++LNLAVGG+LPGR VDD A PATMLVDYVRVY+I+  V EAEPFLG P+CLPG
Sbjct:  152 MDTILGTIHYGGEWPMNLHAGCVSSQLGTGLDYSSDYHVYAVEWEQDEMRWYVDDQLFCQRTKWTSNVTSNEPYQAPFDAEFEIILNLAVGGSLPGRVVDDGALPATMLVDYVRVYDITTDVAEAEPFLGAPLCLPG 288          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A7Y2VM67_9GAMM (Glycoside hydrolase family 16 protein n=2 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2VM67_9GAMM)

HSP 1 Score: 118 bits (296), Expect = 5.070e-29
Identity = 63/125 (50.40%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAG--CKQSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAVVPEAEP 124
            + IL TIHYGG +P+N F+G   +  SG  F  DFH FAIEW + E+ WYVDD L+  +T W+S   + G++ APFD  F LLLN+AVGG LPG    +T FP  ++VDYVRVY       EA+P
Sbjct:  168 EEILGTIHYGGEWPNNTFSGQEYRLDSG-SFHDDFHEFAIEWEEGEIRWYVDDVLYSTKTNWTS---NGGAFPAPFDKRFHLLLNMAVGGNLPGAPDANTLFPQELVVDYVRVYQ------EADP 282          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0YDK3_9GAMM (Beta-glucanase/Beta-glucan synthetase n=1 Tax=marine gamma proteobacterium HTCC2143 TaxID=247633 RepID=A0YDK3_9GAMM)

HSP 1 Score: 115 bits (289), Expect = 9.760e-29
Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCKQSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYN 114
            +++  TIHYG  +PDN+  G +     D + DFH +A+EW + EM WYVDD L+  +  W +T  D   + APFD  F +LLN+AVGG  PG    +TAFPA M VDYVRVY+
Sbjct:  204 NTVYGTIHYGSVWPDNVATGSQYLVSSDATADFHDYALEWDETEMRWYVDDNLYAVQNAWGTTAAD---FPAPFDQPFYVLLNVAVGGDFPGAPDTETAFPAVMEVDYVRVYS 313          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A524K1E4_9GAMM (Glycoside hydrolase family 16 protein (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A524K1E4_9GAMM)

HSP 1 Score: 115 bits (288), Expect = 1.460e-27
Identity = 57/122 (46.72%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCKQSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAVVPEAE 123
            + I  T+HYGG +P N F+G         +G FH +AIEW + E+ WYVDDQL   +  W ST    G + APFD  F LLLN AVGG   G   D T FPAT ++DYVRVY +    P A+
Sbjct:  191 EKIYNTLHYGGPFPANTFSGSGTFLPAGTAGSFHEYAIEWQRGEIRWYVDDQLVSTQNSWYSTA---GPFPAPFDVNFHLLLNFAVGGNFVGNPSDSTVFPATYVIDYVRVYALPVDPPLAQ 309          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: M5RMC1_9BACT (Glycoside hydrolase family 16 n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5RMC1_9BACT)

HSP 1 Score: 107 bits (268), Expect = 4.520e-27
Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCKQS-SGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYN 114
            D +L T+HYG  +P N ++G K       F+ DFH F++ W + +++W +D + +  +T WSST    G + APFD EF LLLN+AVGG   G   D T FPA MLVDYVRVY 
Sbjct:   59 DEVLGTLHYGDVWPRNAYSGDKYKLPNGSFADDFHTFSVVWKEGQIDWLIDGKKYQTQTKWSSTG---GEFPAPFDQEFHLLLNVAVGGNFLGPPNDSTPFPAKMLVDYVRVYQ 169          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: UPI0019B0D815 (family 16 glycosylhydrolase n=1 Tax=Saccharospirillum salsuginis TaxID=418750 RepID=UPI0019B0D815)

HSP 1 Score: 112 bits (280), Expect = 5.990e-27
Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCKQSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAV 118
            + +  T+HYGG++PDN+++G   +     + +FH +A+EW   E+ WYVD  L+  +T W S   D G+Y APFD +F LLLN+AVGG  PG     T FP  M VDYVRVY   A+
Sbjct:  160 NDVHGTLHYGGSWPDNVYSGQVYTPSTSVTDNFHTYAVEWEPGEIRWYVDGLLYQTQTEWYS---DNGAYPAPFDQDFHLLLNVAVGGDWPGDPDSTTVFPTAMQVDYVRVYQDPAI 273          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A7Y1TI90_9GAMM (Family 16 glycosylhydrolase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1TI90_9GAMM)

HSP 1 Score: 114 bits (285), Expect = 7.500e-27
Identity = 60/124 (48.39%), Postives = 71/124 (57.26%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCK--QSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAVVPEAE 123
            D+I  TIHYG ++P NLF+  +   S    F  DFH FAIEW   E+ WYVD   F  R  W ST    G + APFD +F LLLNLAVGG LPG     T FP   ++DYVRVY +    P  E
Sbjct:  171 DTIFGTIHYGASFPGNLFSSTEFTLSGPPSFHDDFHTFAIEWENGEIRWYVDGVQFASRDSWFSTG---GPFPAPFDVDFHLLLNLAVGGNLPGPPDGTTVFPQEYVIDYVRVYQVPNDKPVVE 291          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A368NMN2_9GAMM (Uncharacterized protein n=3 Tax=Corallincola TaxID=1775176 RepID=A0A368NMN2_9GAMM)

HSP 1 Score: 114 bits (284), Expect = 1.020e-26
Identity = 59/137 (43.07%), Postives = 80/137 (58.39%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCKQSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAVVPEAE----PFLGLPVCLPG 134
            +SI  T+HYGG +PDN  +G K +   + +  FH +++EW  E + WY+D +L+  +T W S   + GSY APFD  F L+LN+AVGG  PG    +T FP  M VDYVRVY      P  E    P+ G  V +PG
Sbjct:  466 NSIHGTLHYGGKWPDNTHSGDKVTPATNVATQFHTYSVEWEPEAIRWYIDGKLYQTQTQWWS---EGGSYPAPFDQRFHLILNVAVGGNWPGSPNQNTVFPQIMEVDYVRVYEKGQQQPGDECDSLPYGGRAVGIPG 599          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A3M2CPB4_9BACT (Glycosyl hydrolase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CPB4_9BACT)

HSP 1 Score: 112 bits (280), Expect = 1.640e-26
Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = 0
Query:    2 DSILATIHYGGTYPDNLFAGCKQSSGMDFSGDFHVFAIEWLKEEMNWYVDDQLFCHRT--MWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYNISAVVPEAEPFLGLPVCLPG 134
            D I  T+H+G  +P+N   G   ++G DFS +FH +AIEW  +++ WY+D QL+  +    W S     G+ RAPFD EF LLLN+AVGG  PG     + +P T+ VDY+RV+       E  PF G P  +PG
Sbjct:  154 DRIYGTLHFGSVWPNNASTGGSFANGTDFSQNFHDYAIEWDPDQIRWYIDGQLYSTKNADQWFSAASS-GNARAPFDHEFHLLLNVAVGGAFPGNPDGSSQWPQTLEVDYIRVFRR-----EQAPFGGTPHAIPG 282          
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Match: A0A800M6J3_9BACT (Glycoside hydrolase family 16 protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M6J3_9BACT)

HSP 1 Score: 108 bits (270), Expect = 3.500e-26
Identity = 56/112 (50.00%), Postives = 71/112 (63.39%), Query Frame = 0
Query:    4 ILATIHYGGTYPDNLFAGCKQSSGMD-FSGDFHVFAIEWLKEEMNWYVDDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTAFPATMLVDYVRVYN 114
            +  T+HYGG  P N+F+        D F  DF+VFA+EW + E+ WYV++ L+   T W ST    G+Y APFD +F LLLN+AVGG LPG   + T FP TM VDYVRVY 
Sbjct:  176 VFGTLHYGGPAPGNVFSSRDFQLTYDTFDRDFYVFALEWEEGEIRWYVNNVLYRTETEWYSTG---GAYPAPFDHDFHLLLNVAVGGNLPGAPDETTTFPQTMEVDYVRVYQ 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107414.611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV09_9PHAE2.780e-5666.42GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7Y2VM67_9GAMM5.070e-2950.40Glycoside hydrolase family 16 protein n=2 Tax=Xant... [more]
A0YDK3_9GAMM9.760e-2947.79Beta-glucanase/Beta-glucan synthetase n=1 Tax=mari... [more]
A0A524K1E4_9GAMM1.460e-2746.72Glycoside hydrolase family 16 protein (Fragment) n... [more]
M5RMC1_9BACT4.520e-2746.49Glycoside hydrolase family 16 n=2 Tax=Rhodopirellu... [more]
UPI0019B0D8155.990e-2745.30family 16 glycosylhydrolase n=1 Tax=Saccharospiril... [more]
A0A7Y1TI90_9GAMM7.500e-2748.39Family 16 glycosylhydrolase n=1 Tax=Woeseiaceae ba... [more]
A0A368NMN2_9GAMM1.020e-2643.07Uncharacterized protein n=3 Tax=Corallincola TaxID... [more]
A0A3M2CPB4_9BACT1.640e-2642.22Glycosyl hydrolase family protein n=1 Tax=Planctom... [more]
A0A800M6J3_9BACT3.500e-2650.00Glycoside hydrolase family 16 protein n=1 Tax=Bact... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 1..120
e-value: 2.0E-28
score: 102.0
NoneNo IPR availablePANTHERPTHR10963:SF55coord: 7..113
NoneNo IPR availablePANTHERPTHR10963GLYCOSYL HYDROLASE-RELATEDcoord: 7..113
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 21..111
e-value: 4.2E-9
score: 36.1
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 1..118
score: 10.238
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 9..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107414contigH-elongata_contig107414:1059..2144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107414.611.1mRNA_H-elongata_contig107414.611.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107414 1059..2158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107414.611.1 ID=prot_H-elongata_contig107414.611.1|Name=mRNA_H-elongata_contig107414.611.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MDSILATIHYGGTYPDNLFAGCKQSSGMDFSGDFHVFAIEWLKEEMNWYV
DDQLFCHRTMWSSTLEDLGSYRAPFDAEFELLLNLAVGGTLPGRFVDDTA
FPATMLVDYVRVYNISAVVPEAEPFLGLPVCLPG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf