prot_H-elongata_contig107342.606.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107342.606.1
Unique Nameprot_H-elongata_contig107342.606.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig107342.606.1 vs. uniprot
Match: UPI001C1A7FCD (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1A7FCD)

HSP 1 Score: 48.9 bits (115), Expect = 9.980e-5
Identity = 23/64 (35.94%), Postives = 39/64 (60.94%), Query Frame = 0 
Query:   20 HIAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHDCAAHKIELALRPGLI 83
            H A+ I   L  +++++ +   V  ITTD AAN+KKA + +    EW +C+AH ++L +  GL+
Sbjct:  219 HTAQHITESLEEILEKWNLRDKVFTITTDNAANMKKAISNM-NAVEWQECSAHILQLIIGKGLV 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107342.606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001C1A7FCD9.980e-535.94Hypothetical protein n=2 Tax=Rhizophagus irregular... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107342contigH-elongata_contig107342:1808..2056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107342.606.1mRNA_H-elongata_contig107342.606.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107342 1808..2056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107342.606.1 ID=prot_H-elongata_contig107342.606.1|Name=mRNA_H-elongata_contig107342.606.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
CSIQVRSPISYIMPEFPGSHIAERIAAELTTVMKQYEIETSVVAITTDTA
ANIKKAGTQLLPQQEWHDCAAHKIELALRPGLI
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