prot_H-elongata_contig107144.593.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107144.593.1
Unique Nameprot_H-elongata_contig107144.593.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig107144.593.1 vs. uniprot
Match: D7FWR5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR5_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 7.440e-21
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 0 
Query:   41 ARTSQLKAFMANANTLRNALNVSKLWISRRLLIVESALLRTYGGVSLTARTQDAIKQGRRVRMR 104
            ARTSQL+AFM NA+T R+ L+VSKLWISRR+L+ E+ LLR YGGV  TAR QDAI+QGRRVR+R
Sbjct:  178 ARTSQLRAFMINADTSRSVLDVSKLWISRRMLVAETTLLRAYGGVGPTARAQDAIRQGRRVRLR 241
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107144.593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWR5_ECTSI7.440e-2171.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107144contigH-elongata_contig107144:1508..2074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107144.593.1mRNA_H-elongata_contig107144.593.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107144 1508..2086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107144.593.1 ID=prot_H-elongata_contig107144.593.1|Name=mRNA_H-elongata_contig107144.593.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MIKEAQGIHRAGGIAGGGYAGGGGPASGVHVPAVEIAAVEARTSQLKAFM
ANANTLRNALNVSKLWISRRLLIVESALLRTYGGVSLTARTQDAIKQGRR
VRMR*
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