prot_H-elongata_contig107125.588.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107125.588.1
Unique Nameprot_H-elongata_contig107125.588.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
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BLAST of mRNA_H-elongata_contig107125.588.1 vs. uniprot
Match: A0A6H5L191_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L191_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.800e-52
Identity = 80/107 (74.77%), Postives = 93/107 (86.92%), Query Frame = 0 
Query:    1 QVYLNPSRYLEFFDGETEGARKGMLSRWANEMNKKGTWADQLFINAVARAHQVANVRILVPSGKDTLRDEQGNYAGQGTAKKTYYMLHTGGSHFEALKVLGKVHPID 107
            QVY +P+RY++FFDGETEG RKGML +W   M +KG WADQLFINAVARAH+V N+RILVP   +TLRDEQGNYAGQGTA++TYYMLHTGG+HFEALK LG+V PID
Sbjct:   82 QVYSHPARYMDFFDGETEGRRKGMLYKWTRLMRQKGEWADQLFINAVARAHEV-NIRILVPEKNNTLRDEQGNYAGQGTARRTYYMLHTGGNHFEALKALGEVKPID 187
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107125.588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L191_9PHAE5.800e-5274.77OTU domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 5..104
e-value: 2.3E-8
score: 36.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107125contigH-elongata_contig107125:630..2069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107125.588.1mRNA_H-elongata_contig107125.588.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107125 630..2069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107125.588.1 ID=prot_H-elongata_contig107125.588.1|Name=mRNA_H-elongata_contig107125.588.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
QVYLNPSRYLEFFDGETEGARKGMLSRWANEMNKKGTWADQLFINAVARA
HQVANVRILVPSGKDTLRDEQGNYAGQGTAKKTYYMLHTGGSHFEALKVL
GKVHPID
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