prot_H-elongata_contig107019.579.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig107019.579.1
Unique Nameprot_H-elongata_contig107019.579.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: D7FQ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 5.970e-40
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            +FGFRTHFGGGKSTGFCLIYDS+EDMKKFEPKHRL RAGL++K ETSRKQIKEAKN++K IRGTGRRIA HKAKKAAK
Sbjct:   58 LFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 135          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: A0A7S2US90_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US90_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.720e-34
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            +FGFRT FGG KSTGFCLIYDS+ED KKFEPK RLVR GL EK ETSRKQIKEAKN+ K IRGTGRRIA HKAKKA K
Sbjct:   59 LFGFRTAFGGNKSTGFCLIYDSVEDAKKFEPKFRLVRLGLAEKTETSRKQIKEAKNRGKKIRGTGRRIARHKAKKANK 136          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: F0YI50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI50_AURAN)

HSP 1 Score: 121 bits (304), Expect = 7.720e-34
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            +FGFR  FGGGKSTGFCLIYDS E  KK+EPK+RL+R G+ EK ETSRKQIKEAKN++K +RGTGRRIANHKAKKAAK
Sbjct:   58 LFGFRNKFGGGKSTGFCLIYDSAEAAKKYEPKYRLIRNGIVEKKETSRKQIKEAKNRKKKVRGTGRRIANHKAKKAAK 135          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: W7U6J8_9STRA (40S ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6J8_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.600e-33
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            +FGFRT FGGGKSTGF LIYD++ED KKFEPKHRLVRAGL  K ETSRKQIKEAKN+ K IRGTGRR+A HKAKKA K
Sbjct:   60 LFGFRTAFGGGKSTGFALIYDTLEDAKKFEPKHRLVRAGLVVKKETSRKQIKEAKNRAKKIRGTGRRLAKHKAKKANK 137          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: A0A7S2FWG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWG9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.310e-32
Identity = 62/76 (81.58%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    3 GFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            GF THFGGGK+TGFC IYD+IE  KKFEPK R +R GL EK ETSRKQIKEAKNKRK IRGTGRRIA HKAKKAAK
Sbjct:   62 GFLTHFGGGKTTGFCCIYDNIEAAKKFEPKFRCIRNGLMEKTETSRKQIKEAKNKRKKIRGTGRRIAAHKAKKAAK 137          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: A0A7S4HQJ4_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4HQJ4_9STRA)

HSP 1 Score: 116 bits (291), Expect = 7.310e-32
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAA 77
            +FGFRT FGGGKSTGFCL+YDS E ++KFEPKHRLVR G++EK ETSRK +KEAKNK K +RGTGR IA HKAK+AA
Sbjct:   58 LFGFRTKFGGGKSTGFCLVYDSEEALRKFEPKHRLVRQGIQEKKETSRKAMKEAKNKGKKVRGTGRSIAKHKAKRAA 134          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: A0A8J2WEF7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEF7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.750e-32
Identity = 63/82 (76.83%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKT----IRGTGRRIANHKAKKAAK 78
            +FGFR  FGGGKSTGFCLIYDS E  KK+EPK+RLVR G  EK ETSRKQIKEAKN++K     IRGTGRRIANHKAKKAAK
Sbjct:   64 LFGFRNKFGGGKSTGFCLIYDSAESAKKYEPKYRLVRNGFVEKKETSRKQIKEAKNRKKKQIRQIRGTGRRIANHKAKKAAK 145          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: F0WPH7_9STRA (40S ribosomal protein S24 n=3 Tax=Albugo TaxID=65356 RepID=F0WPH7_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.200e-31
Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            ++GFRT FGGGKSTGF LIYDS+ D K+FEPK+RL+R GL EKVE+SRKQIKEAKN++K IRG GRRIA HKA KA K
Sbjct:   60 LYGFRTQFGGGKSTGFGLIYDSVNDAKRFEPKYRLIRQGLAEKVESSRKQIKEAKNRKKKIRGVGRRIARHKAAKANK 137          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: B7G2B5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2B5_PHATC)

HSP 1 Score: 114 bits (285), Expect = 5.960e-31
Identity = 59/77 (76.62%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAA 77
            +FGFRT FGGGKSTGFCLIYD+ E M+KFEPKHRL+R GL EK E SRK IKEAKNK K IRGTG  IA HKAK+AA
Sbjct:   58 LFGFRTKFGGGKSTGFCLIYDNEESMRKFEPKHRLIRQGLVEKKEQSRKAIKEAKNKAKKIRGTGASIAKHKAKRAA 134          
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Match: M4BX32_HYAAE (40S ribosomal protein S24 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX32_HYAAE)

HSP 1 Score: 112 bits (280), Expect = 2.290e-30
Identity = 56/78 (71.79%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQIKEAKNKRKTIRGTGRRIANHKAKKAAK 78
            ++GFRT FGGGKS+GF L+YDS+ D K+FEPK+RL+R GL EKVETSRKQIKEAKN+ K +RG GRRIA HKA KA K
Sbjct:   46 LYGFRTQFGGGKSSGFGLVYDSVNDAKRFEPKYRLIRQGLVEKVETSRKQIKEAKNRAKKVRGVGRRIARHKAAKANK 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig107019.579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ68_ECTSI5.970e-4087.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US90_9STRA3.720e-3482.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YI50_AURAN7.720e-3478.21Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7U6J8_9STRA1.600e-3380.7740S ribosomal protein S24 n=2 Tax=Monodopsidaceae ... [more]
A0A7S2FWG9_9STRA1.310e-3281.58Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4HQJ4_9STRA7.310e-3275.32Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
A0A8J2WEF7_9STRA9.750e-3276.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0WPH7_9STRA4.200e-3174.3640S ribosomal protein S24 n=3 Tax=Albugo TaxID=653... [more]
B7G2B5_PHATC5.960e-3176.62Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
M4BX32_HYAAE2.290e-3071.7940S ribosomal protein S24 n=1 Tax=Hyaloperonospora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..57
NoneNo IPR availableGENE3D3.30.70.3370coord: 1..78
e-value: 2.3E-30
score: 106.9
NoneNo IPR availablePRODOMPD006052coord: 2..28
e-value: 4.0E-7
score: 123.0
IPR001976Ribosomal protein S24ePFAMPF01282Ribosomal_S24ecoord: 1..45
e-value: 2.1E-21
score: 75.7
IPR001976Ribosomal protein S24ePANTHERPTHR1049640S RIBOSOMAL PROTEIN S24coord: 1..76
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig107019contigH-elongata_contig107019:406..986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig107019.579.1mRNA_H-elongata_contig107019.579.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig107019 2..2036 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig107019.579.1 ID=prot_H-elongata_contig107019.579.1|Name=mRNA_H-elongata_contig107019.579.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
MFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKHRLVRAGLKEKVETSRKQ
IKEAKNKRKTIRGTGRRIANHKAKKAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001976Ribosomal_S24e
IPR012678Ribosomal_L23/L15e_core_dom_sf