prot_H-elongata_contig106974.574.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106974.574.1
Unique Nameprot_H-elongata_contig106974.574.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
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BLAST of mRNA_H-elongata_contig106974.574.1 vs. uniprot
Match: D8LGF8_ECTSI (OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF8_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 6.270e-19
Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 MQNLTAPGDWNRQHTPLKHFNWSEGCFNFHFIDKETTDGGPS 42
            MQNLTAPGDWNRQ++ LKHFNWSEGCFNFHFID++TTDGG S
Sbjct:   48 MQNLTAPGDWNRQNSALKHFNWSEGCFNFHFIDQDTTDGGLS 89
[Close]
BLAST of mRNA_H-elongata_contig106974.574.1 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.790e-18
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:    1 MQNLTAPGDWNRQHTPLKHFNWSEGCFNFHFIDKETTDGGPS 42
            MQNLTAPGDWNRQ+  LKHFNWSEGCFNFHFID++TTDGG S
Sbjct:   48 MQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLS 89
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106974.574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF8_ECTSI6.270e-1985.71OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5J9H9_9PHAE1.790e-1885.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106974contigH-elongata_contig106974:1193..1321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106974.574.1mRNA_H-elongata_contig106974.574.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106974 1193..1327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106974.574.1 ID=prot_H-elongata_contig106974.574.1|Name=mRNA_H-elongata_contig106974.574.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MQNLTAPGDWNRQHTPLKHFNWSEGCFNFHFIDKETTDGGPSH
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