prot_H-elongata_contig10696.572.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10696.572.1
Unique Nameprot_H-elongata_contig10696.572.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A6P5NKP5_ARADU (uncharacterized protein LOC110280442 n=1 Tax=Arachis duranensis TaxID=130453 RepID=A0A6P5NKP5_ARADU)

HSP 1 Score: 58.9 bits (141), Expect = 1.870e-8
Identity = 29/65 (44.62%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    4 LGEVTLEDWEAHNVDVEQAFIRPAM-EEIYIKLPEEFHDFPGAVGKLTRSLYGIVQASRNWNTHL 67
            L    ++ W    +DV  AF+   + EE+Y+K+PE  H  PG V KL +SLYG+ QASR WN+ L
Sbjct:    5 LALAAVKGWHLKQIDVNTAFLHGDLDEEVYMKVPEGLHAKPGQVCKLEKSLYGLKQASRQWNSKL 69          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: M8BR71_AEGTA (Integrase catalytic domain-containing protein n=1 Tax=Aegilops tauschii TaxID=37682 RepID=M8BR71_AEGTA)

HSP 1 Score: 56.6 bits (135), Expect = 1.290e-7
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   11 DWEAHNVDVEQAFIRPAM-EEIYIKLPEEFHDFPGA--VGKLTRSLYGIVQASRNWNTH 66
            D+E   +DV+ AF+   + EE+Y+  PE F D  GA  VGKL RS+YG+VQASR+WN H
Sbjct:  281 DYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKGANTVGKLQRSIYGLVQASRSWNIH 339          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A1R3G1W7_COCAP (Uncharacterized protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3G1W7_COCAP)

HSP 1 Score: 56.6 bits (135), Expect = 1.290e-7
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   11 DWEAHNVDVEQAFIRPAM-EEIYIKLPEEFHDFPGAVGKLTRSLYGIVQASRNWNTHLTNT 70
            +W  H  DV  AF+   + EE+Y+KLPE +    G V +L +SLYG+ QASR WN  LT T
Sbjct:  830 NWFLHQCDVNNAFLHGNLDEEVYMKLPEGYSHEKGKVCRLQKSLYGLKQASRQWNAKLTAT 890          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A1R3I9P8_COCAP (No apical meristem (NAM) protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I9P8_COCAP)

HSP 1 Score: 56.2 bits (134), Expect = 1.750e-7
Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0
Query:    4 LGEVTLEDWEAHNVDVEQAFIRPAMEE-IYIKLPEEFHDFPGAVGKLTRSLYGIVQASRNWNTHLTNT 70
            L    +  W    +D+  AF+   +EE +Y+KLPE +   P  V +L +SLYG+ QASR WN  LT T
Sbjct:  413 LSLAAIHGWHLQQLDINNAFLHGDLEEEVYMKLPEGYSAEPNKVCRLIKSLYGLKQASRQWNMKLTTT 480          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: UPI00125DF641 (uncharacterized protein LOC116033393 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF641)

HSP 1 Score: 56.2 bits (134), Expect = 1.770e-7
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    4 LGEVTLEDWEAHNVDVEQAFIRPAM-EEIYIKLPEEFHDF-PGAVGKLTRSLYGIVQASRNWNTHLT 68
            L   T  +W  H +D+  AF+   + EE+Y+ LP  F    P  V KLTRSLYG+ QASR WN  LT
Sbjct: 2302 LAVATSRNWYIHQMDINNAFLHGDLKEEVYMVLPPGFQGTKPNQVCKLTRSLYGLKQASRQWNAKLT 2368          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: UPI000900F50B (uncharacterized protein LOC109153165 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900F50B)

HSP 1 Score: 55.8 bits (133), Expect = 2.290e-7
Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    4 LGEVTLEDWEAHNVDVEQAFIRPAM-EEIYIKLPEEFH-DFPGAVGKLTRSLYGIVQASRNWNTHLTN 69
            L   T +DW  H +DV  AF+   + E++Y+ LP  F  + P  V KL RSLYG+ QASR WN  L++
Sbjct:   79 LAVTTSKDWNIHQMDVNNAFLHDDLNEDVYMVLPPGFQSEKPNQVCKLLRSLYGLKQASRQWNEKLSS 146          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A2U1NFL3_ARTAN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NFL3_ARTAN)

HSP 1 Score: 55.8 bits (133), Expect = 2.340e-7
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    8 TLEDWEAHNVDVEQAFIRPAMEE-IYIKLPEEFHD-FPGAVGKLTRSLYGIVQASRNWNTHL 67
            T + W  H +DV  AF+   +EE IY+K PE ++   PG V KL +SLYG+ QASR WN  L
Sbjct:  136 TAKGWPLHQLDVNNAFLHGYVEEEIYMKPPEGYNKALPGQVCKLNKSLYGLKQASRQWNQEL 197          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A1U8Q9G1_NELNU (LOW QUALITY PROTEIN: uncharacterized protein LOC104605769 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8Q9G1_NELNU)

HSP 1 Score: 55.5 bits (132), Expect = 3.300e-7
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    4 LGEVTLEDWEAHNVDVEQAFIRPAM-EEIYIKLPEEFHDF-PGAVGKLTRSLYGIVQASRNWNTHLTN 69
            L    ++DW  H +D+  AF+   + EE+Y+ LP  F    P  + +LT+SLYG+ QASR WN  LT+
Sbjct: 1237 LAVAAIKDWHLHQLDINNAFLHGDLHEEVYMTLPPGFETSDPSKMCRLTKSLYGLNQASRQWNKKLTD 1304          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A7C8ZHN0_OPUST (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZHN0_OPUST)

HSP 1 Score: 52.8 bits (125), Expect = 7.750e-7
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    4 LGEVTLEDWEAHNVDVEQAFIRPAM-EEIYIKLPEEFHDF-PGAVGKLTRSLYGIVQASRNWNTHLT 68
            +   T + W  H +D+  AF+   + EE+Y+  PE +    PG V KL RSLYG+ QASR WN  LT
Sbjct:   18 IAMATAKAWPLHQLDINNAFLHGYIDEEVYMVPPEGYTKAQPGQVCKLQRSLYGLKQASRQWNLELT 84          
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Match: A0A2K3PMG3_TRIPR (Flavonol sulfotransferase-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PMG3_TRIPR)

HSP 1 Score: 53.9 bits (128), Expect = 1.150e-6
Identity = 31/71 (43.66%), Postives = 41/71 (57.75%), Query Frame = 0
Query:    2 MSLGEVTLEDWEAHNVDVEQAFIRPAM-EEIYIKLPEEFH-DFPGAVGKLTRSLYGIVQASRNWNTHLTNT 70
            M L    +++W  + +DV  AF+   + EE+Y+K P       P  V KL RSLYG+ QASR WNT LT T
Sbjct: 1033 MFLAIAAIQNWPLYQLDVNTAFLHGDLDEEVYMKPPPGLDLPSPNLVCKLQRSLYGLKQASRQWNTKLTQT 1103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10696.572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P5NKP5_ARADU1.870e-844.62uncharacterized protein LOC110280442 n=1 Tax=Arach... [more]
M8BR71_AEGTA1.290e-752.54Integrase catalytic domain-containing protein n=1 ... [more]
A0A1R3G1W7_COCAP1.290e-747.54Uncharacterized protein n=1 Tax=Corchorus capsular... [more]
A0A1R3I9P8_COCAP1.750e-741.18No apical meristem (NAM) protein n=1 Tax=Corchorus... [more]
UPI00125DF6411.770e-746.27uncharacterized protein LOC116033393 n=1 Tax=Ipomo... [more]
UPI000900F50B2.290e-744.12uncharacterized protein LOC109153165 n=1 Tax=Ipomo... [more]
A0A2U1NFL3_ARTAN2.340e-748.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1U8Q9G1_NELNU3.300e-741.18LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A7C8ZHN0_OPUST7.750e-743.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3PMG3_TRIPR1.150e-643.66Flavonol sulfotransferase-like protein n=1 Tax=Tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..70
e-value: 1.6E-10
score: 41.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10696contigH-elongata_contig10696:7223..7438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10696.572.1mRNA_H-elongata_contig10696.572.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10696 7007..7621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10696.572.1 ID=prot_H-elongata_contig10696.572.1|Name=mRNA_H-elongata_contig10696.572.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MMSLGEVTLEDWEAHNVDVEQAFIRPAMEEIYIKLPEEFHDFPGAVGKLT
RSLYGIVQASRNWNTHLTNTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2