prot_H-elongata_contig106762.555.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106762.555.1
Unique Nameprot_H-elongata_contig106762.555.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length414
Homology
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BLAST of mRNA_H-elongata_contig106762.555.1 vs. uniprot
Match: A0A6H5KJ68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ68_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 6.990e-5
Identity = 101/302 (33.44%), Postives = 130/302 (43.05%), Query Frame = 0 
Query:  120 ARQDIEETLLMANKELQRLKVKCEEATSETEAARAESKSLKAALETARATAANHAKFDNKKEKEHYNDNQXXXXXASTARRDSRAEMAQLREKIVELERAR-EVGRYSARGTSGGGSERNRQRGGDSLEERLET------GKAKADAENEIDEEMDSLRADLRRAREEAAARAAGLETQLADRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSSGGARSIADSRGSNTDSGSGKQGNVQRKGAKDPAALGAEVGSTVGGILRGKLWSGWG 414
            AR  +EETLLMANKELQRLK+K EEA S +   R E + LKA +ET RA A   A  D   +    +         +    +   E A+LR  + E++R   EVG    RG  G  S  + +   DS  +  E       GK +A  + +I  E DSLRA+L      A+ +             XXXXXXXXX                                                 PSS  A S+    G    +G G   + +  G +DPA++GAEVG  VGGILRGK WSGWG
Sbjct:  527 ARLAVEETLLMANKELQRLKIKNEEALSASNGLREECEVLKATVETLRAAAVA-AAGDGGNKLNDVSTAVATQTDEAEENEEKEGEFARLRAVVEEMKRGGDEVG--VVRGCVGDVSSHDGRDPDDSGSDEEEGDGARRHGKGRASTKRQILAERDSLRAEL------ASEKEXXXXXXXXXXXXXXXXXXXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASLRRIPSSS-ATSMVGRGGGRLRAGGGSVASPKSTG-RDPASIGAEVGGAVGGILRGKFWSGWG 817
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106762.555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ68_9PHAE6.990e-533.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableCOILSCoilCoilcoord: 260..337
NoneNo IPR availableCOILSCoilCoilcoord: 121..162
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availableCOILSCoilCoilcoord: 8..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106762contigH-elongata_contig106762:89..1772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106762.555.1mRNA_H-elongata_contig106762.555.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106762 89..1772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106762.555.1 ID=prot_H-elongata_contig106762.555.1|Name=mRNA_H-elongata_contig106762.555.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=414bp
RKEAATAVAATASRVADLEVLLEEAKADRDAALEATASKMAEVKAVANAR
VVEVERARDAAEKGAREEAARASTAQAAVTQLKSKAAQLKEQRVVAVKAS
RKSQADKDAAIEATAAATTARQDIEETLLMANKELQRLKVKCEEATSETE
AARAESKSLKAALETARATAANHAKFDNKKEKEHYNDNQDNQDDASTARR
DSRAEMAQLREKIVELERAREVGRYSARGTSGGGSERNRQRGGDSLEERL
ETGKAKADAENEIDEEMDSLRADLRRAREEAAARAAGLETQLADREREAA
DTQRRLYRHQSELEAELEEVRANYDALRIEMARMDASMQDAADSQADASS
SLVSAPSSGGARSIADSRGSNTDSGSGKQGNVQRKGAKDPAALGAEVGST
VGGILRGKLWSGWG
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