prot_H-elongata_contig106547.539.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106547.539.1
Unique Nameprot_H-elongata_contig106547.539.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.270e-35
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 MYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQ 74
            MYEILGWYTVGTE TELDL IQRQM KFN +PLFLLMNP+PAQGSKELPVLIHESE+H LDG ++  FVQLAFQ
Sbjct:  117 MYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ 190          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.820e-34
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 0
Query:    1 MYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQ 74
            MYEILGWYTVGTE TELDL IQRQM KFN +PLFLLMNP+PAQGSKELPVLIHESE+H LDG ++  FVQLAFQ
Sbjct:  117 MYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ 190          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.430e-18
Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    3 EILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQ 74
            ++LGWY+VG E  E+D+ I R+M K+N++P FLLMNPNP + +K+LP+ ++ESE H ++    ++FV   FQ
Sbjct:  116 DLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQ 187          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A2G5F758_AQUCA (COP9 signalosome complex subunit 6 n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5F758_AQUCA)

HSP 1 Score: 78.6 bits (192), Expect = 1.320e-15
Identity = 33/72 (45.83%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAF 73
            + ILGWY+ G++A ELD++I R +M  N++P+++L+NP      K+LPV I+ESE H +DG  +LIFV+ ++
Sbjct:  107 FYILGWYSTGSDAQELDMQIHRALMDINESPVYVLLNPAINHAHKDLPVTIYESELHVIDGIPQLIFVRSSY 178          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A7N0TEN1_KALFE (COP9 signalosome complex subunit 6 n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TEN1_KALFE)

HSP 1 Score: 77.4 bits (189), Expect = 3.090e-15
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQ 70
            + ILGWY+ GT+A ELD+ I R +M  N++P+++L+NP      K+LPV I ESE H +DG  +LIFV+
Sbjct:   97 FYILGWYSTGTDAHELDMNIHRALMDINESPVYVLLNPLINHAQKDLPVTIFESELHVIDGIPQLIFVR 165          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A397ITZ5_9GLOM (COP9 signalosome complex subunit 6 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397ITZ5_9GLOM)

HSP 1 Score: 76.3 bits (186), Expect = 1.020e-14
Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQ 74
            ++ LGWYT+G   TE D+ I +QMMKFN++PLFL MNP     SK LP+ ++ES    +DG++  +F++  ++
Sbjct:  117 FDFLGWYTMGPYPTEADIEIHKQMMKFNESPLFLQMNPFEMVTSKNLPITVYESIIDIIDGQAHTLFIKSQYK 189          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: F4Q333_CAVFA (COP9 signalosome complex subunit 6 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q333_CAVFA)

HSP 1 Score: 73.9 bits (180), Expect = 1.820e-14
Identity = 30/75 (40.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPA--QGSKELPVLIHESEAHTLDGRSKLIFVQLAFQ 74
            Y+ILGWY+ G++ ++ DL + +Q+M+FN++PL+L+++ N A  Q  K+LPV+++ESE H ++ +   +FV+  F+
Sbjct:  110 YDILGWYSTGSQVSQSDLLLHKQIMEFNESPLYLMLDTNAAFTQAYKDLPVIVYESELHIVNDQPTTLFVKTPFK 184          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A0C9RG54_9SPER (COP9 signalosome complex subunit 6 n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RG54_9SPER)

HSP 1 Score: 74.7 bits (182), Expect = 2.870e-14
Identity = 33/74 (44.59%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNP--NPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAF 73
            Y+ILGWY+ G++A E D++I + +M  N++P+ +L+NP  NP+Q  K+LP+ I+ESE H ++G   LIFV+ ++
Sbjct:   89 YDILGWYSTGSDAQESDMQIHKSLMDINESPVCVLLNPVLNPSQ--KDLPITIYESELHVIEGVPSLIFVRSSY 160          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: D5ABV8_PICSI (COP9 signalosome complex subunit 6 n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ABV8_PICSI)

HSP 1 Score: 74.3 bits (181), Expect = 3.990e-14
Identity = 29/69 (42.03%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQ 70
            Y+ILGWY+ G++  E D++I + +M  N++P+++L+NP      K+LP+ I+ESE H ++G   LIFV+
Sbjct:   89 YDILGWYSTGSDVKETDMQIHKSLMDINESPVYVLLNPAINHAQKDLPITIYESELHIIEGVPSLIFVK 157          
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Match: A0A397VYQ7_9GLOM (COP9 signalosome complex subunit 6 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VYQ7_9GLOM)

HSP 1 Score: 73.2 bits (178), Expect = 1.330e-13
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 YEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQ 74
            ++ LGWYT+G   TE D+ I +QMM+FN++PLFL MNP     SK LP+ ++ES    ++G++  +F++  ++
Sbjct:  116 FDFLGWYTMGPYPTEADIEIHKQMMEFNESPLFLQMNPFEMVTSKNLPITVYESIIDIIEGQAHTLFIKSQYK 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106547.539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLY7_9PHAE2.270e-3582.43JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
D8LBH4_ECTSI4.820e-3482.43COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A7S2BCI8_9STRA2.430e-1847.22COP9 signalosome complex subunit 6 n=1 Tax=Florenc... [more]
A0A2G5F758_AQUCA1.320e-1545.83COP9 signalosome complex subunit 6 n=2 Tax=Thalict... [more]
A0A7N0TEN1_KALFE3.090e-1549.28COP9 signalosome complex subunit 6 n=1 Tax=Kalanch... [more]
A0A397ITZ5_9GLOM1.020e-1443.84COP9 signalosome complex subunit 6 n=1 Tax=Diversi... [more]
F4Q333_CAVFA1.820e-1440.00COP9 signalosome complex subunit 6 n=1 Tax=Cavende... [more]
A0A0C9RG54_9SPER2.870e-1444.59COP9 signalosome complex subunit 6 n=1 Tax=Wollemi... [more]
D5ABV8_PICSI3.990e-1442.03COP9 signalosome complex subunit 6 n=1 Tax=Picea s... [more]
A0A397VYQ7_9GLOM1.330e-1341.10COP9 signalosome complex subunit 6 n=2 Tax=Gigaspo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 1..74
e-value: 1.7E-15
score: 58.6
NoneNo IPR availablePANTHERPTHR10540:SF13coord: 2..73
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106547contigH-elongata_contig106547:278..676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106547.539.1mRNA_H-elongata_contig106547.539.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106547 278..688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106547.539.1 ID=prot_H-elongata_contig106547.539.1|Name=mRNA_H-elongata_contig106547.539.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPV
LIHESEAHTLDGRSKLIFVQLAFQ
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