prot_H-elongata_contig106388.521.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig106388.521.1
Unique Name	prot_H-elongata_contig106388.521.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	95

Homology

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: D8LJ65_ECTSI (tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ65_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.680e-47
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTGVRHGEAY 94
            QVPEDVKADRLQRVMRLGC HAQERS+RYMGR+EEVLVEERNPKNA QVMGRTRTNRPVFL+GDI +L+GKL+K  ITECRPWSLTGV  GE Y
Sbjct:  362 QVPEDVKADRLQRVMRLGCTHAQERSDRYMGRVEEVLVEERNPKNAAQVMGRTRTNRPVFLNGDIGQLKGKLIKAEITECRPWSLTGVAQGEPY 455

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A6H5KNX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX7_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 3.210e-46
Identity = 81/94 (86.17%), Postives = 86/94 (91.49%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTGVRHGEAY 94
            QVPEDVKADRLQRVMRLGC HAQERS+RYMGR+EEVLVEERNPKNA QVMGRTRTNRPVFL+GDI EL+GKL+K  ITECRPWSLTGV  GE Y
Sbjct:  637 QVPEDVKADRLQRVMRLGCTHAQERSDRYMGRVEEVLVEERNPKNAAQVMGRTRTNRPVFLNGDIGELKGKLIKAEITECRPWSLTGVAQGEPY 730

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A7S4DL29_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL29_HETAK)

HSP 1 Score: 136 bits (342), Expect = 1.040e-35
Identity = 70/94 (74.47%), Postives = 74/94 (78.72%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTGVRHGEAY 94
            QVPEDVKADRLQR+ RL   HA ERSERY+GR+EEVLVEERN KN  QV GRTRTNRPVF DGDI EL+GK V  RITE RPWSLTG   G  Y
Sbjct:  451 QVPEDVKADRLQRLQRLATQHAMERSERYLGRIEEVLVEERNVKNIQQVKGRTRTNRPVFFDGDITELQGKHVSVRITETRPWSLTGELAGTPY 544

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A835YXD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 6.840e-34
Identity = 65/92 (70.65%), Postives = 75/92 (81.52%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTGVRHGE 92
            QVPE+VK++RLQ++ RLG  HAQERSERY+GR+ EVLVEERNPKN  QV GR R NRPVF  GDI ELRGKL+  +ITE RPWSLTG R G+
Sbjct:  411 QVPEEVKSERLQKLQRLGAQHAQERSERYLGRVVEVLVEERNPKNPSQVTGRNRQNRPVFFAGDIDELRGKLIDVKITEVRPWSLTGQRAGD 502

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A7S2V0W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.020e-30
Identity = 59/94 (62.77%), Postives = 72/94 (76.60%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTGVRHGEAY 94
            QVP+D+KADRLQR+ RL    A+++S RY+GR  EVLVEERNPK   QV GRTRTNRPVF +GDI  L+GKLV   IT+C  WS++G + GEAY
Sbjct:  261 QVPDDIKADRLQRLQRLAVVQAEQKSRRYIGRTMEVLVEERNPKKPNQVTGRTRTNRPVFFNGDISLLKGKLVPVHITDCGAWSISGEQAGEAY 354

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A7S0B099_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B099_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.430e-30
Identity = 59/87 (67.82%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTG 87
            QVP+DVKA+RLQ+V RL   HA ERSERY+GR  EV+VEERNP+N  QVMGRTR +R VF DGDI EL G LV  ++ E RPWSLTG
Sbjct:  177 QVPDDVKAERLQKVQRLATEHALERSERYVGRTVEVMVEERNPRNVEQVMGRTRQSRQVFFDGDIDELMGSLVDVKVIEARPWSLTG 263

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A0G4ERE5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERE5_VITBC)

HSP 1 Score: 117 bits (292), Expect = 1.710e-28
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTG-VRHGE 92
            Q+P+DVK DRL+R+  L   HA ER+ RY+GR+EEVLVEERN KN  QVMGRTR NR VF DGDI ELRG++V  R+TE RP+SLTG +  GE
Sbjct:  539 QLPDDVKEDRLRRINELAAQHAYERNLRYLGRVEEVLVEERNVKNPTQVMGRTRGNRLVFFDGDIAELRGRMVPVRVTEVRPYSLTGRIERGE 631

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A7S2ACC5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ACC5_TRICV)

HSP 1 Score: 112 bits (281), Expect = 3.170e-28
Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTG 87
            Q+P+DVKA RLQ V RL  AHA ERSERY+GR+EEVLVE+RNP++  QVMGRTR  R VF DGD+ EL G  V+  I E RPWSL G
Sbjct:  224 QIPDDVKAQRLQIVQRLATAHALERSERYVGRVEEVLVEDRNPRDLGQVMGRTRQGRQVFFDGDVDELMGHTVEVEIVEARPWSLVG 310

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: UPI00036EB697 (MiaB/RimO family radical SAM methylthiotransferase n=1 Tax=Fischerella muscicola TaxID=92938 RepID=UPI00036EB697)

HSP 1 Score: 109 bits (273), Expect = 9.370e-28
Identity = 58/87 (66.67%), Postives = 69/87 (79.31%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTG 87
            Q+ E+VK+DRLQR+  L    A ERS+RYMGRLEEVLVE++NPK+  QVMGRTRTNR  F  GDI EL+GKLVK +ITE R +SLTG
Sbjct:  137 QLSEEVKSDRLQRLNHLVAIKAAERSQRYMGRLEEVLVEDQNPKDKTQVMGRTRTNRLTFFTGDINELKGKLVKVKITEVRAFSLTG 223

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BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Match: A0A6P0U6U2_9CYAN (TRAM domain-containing protein (Fragment) n=2 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0U6U2_9CYAN)

HSP 1 Score: 107 bits (267), Expect = 1.480e-27
Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 0

Query:    1 QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVMGRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTG 87
            Q+ E+VKADRLQR+  L    A ERS+RYMGR EE+LVE+ N KNA QVMGRTR NR  F +GDI +L+GKLVK +ITE RP+SLTG
Sbjct:   75 QLSEEVKADRLQRLNHLVGVKAAERSQRYMGRTEEILVEDTNHKNAAQVMGRTRGNRLTFFEGDINKLKGKLVKVKITEVRPFSLTG 161

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot

BLAST of mRNA_H-elongata_contig106388.521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJ65_ECTSI	2.680e-47	85.11	tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=E...	[more]
A0A6H5KNX7_9PHAE	3.210e-46	86.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S4DL29_HETAK	1.040e-35	74.47	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A835YXD9_9STRA	6.840e-34	70.65	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2V0W1_9STRA	1.020e-30	62.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S0B099_9STRA	1.430e-30	67.82	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
A0A0G4ERE5_VITBC	1.710e-28	64.52	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]
A0A7S2ACC5_TRICV	3.170e-28	65.52	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
UPI00036EB697	9.370e-28	66.67	MiaB/RimO family radical SAM methylthiotransferase...	[more]
A0A6P0U6U2_9CYAN	1.480e-27	65.52	TRAM domain-containing protein (Fragment) n=2 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002792	TRAM domain	PFAM	PF01938	TRAM	coord: 28..87 e-value: 4.6E-12 score: 45.8
IPR002792	TRAM domain	PROSITE	PS50926	TRAM	coord: 27..91 score: 12.804
None	No IPR available	PANTHER	PTHR43020	FAMILY NOT NAMED	coord: 1..88
None	No IPR available	PANTHER	PTHR43020:SF3		coord: 1..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig106388	contig	H-elongata_contig106388:366..997 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig106388.521.1	mRNA_H-elongata_contig106388.521.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig106388 366..997 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig106388.521.1 ID=prot_H-elongata_contig106388.521.1|Name=mRNA_H-elongata_contig106388.521.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
QVPEDVKADRLQRVMRLGCAHAQERSERYMGRLEEVLVEERNPKNAVQVM
GRTRTNRPVFLDGDIVELRGKLVKTRITECRPWSLTGVRHGEAY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002792	TRAM_dom