prot_H-elongata_contig106241.509.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106241.509.1
Unique Nameprot_H-elongata_contig106241.509.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 6.650e-60
Identity = 108/145 (74.48%), Postives = 122/145 (84.14%), Query Frame = 0
Query:    1 MYLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALRS 145
            MY EAPFEEITLDEFEL+ALDRLQ+LRK EDLKA         RNVRG+D++RAL+E L+K+MK+STL+E+SA A +RKD ISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSP EM +FI  H L F+VV  ERKAALRS
Sbjct:   29 MYNEAPFEEITLDEFELVALDRLQVLRKIEDLKA---------RNVRGDDFRRALRESLHKYMKLSTLNEESASADKRKDTISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPAEMSKFIPEHGLFFEVVTPERKAALRS 164          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.950e-39
Identity = 83/145 (57.24%), Postives = 104/145 (71.72%), Query Frame = 0
Query:    1 MYLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALRS 145
            MY   P EE+TLDEFEL ALDRL +LRK EDLKA         R  +G ++   L++ +N HMK+++LSE+   A R KD +SHFILRLAYCR+EDLRRWFLTQE+ALFR+RLE LS T +  FI ++ L F+VV A+ KAA RS
Sbjct:   27 MYTTPPSEELTLDEFELFALDRLTVLRKLEDLKA---------RGYKGREFTEHLEKAVNTHMKINSLSENVEEAIR-KDTVSHFILRLAYCRTEDLRRWFLTQESALFRYRLESLSSTGIISFIQSNGLAFEVVSADDKAARRS 161          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: A0A1X2GGF2_9FUNG (DNA primase large subunit n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GGF2_9FUNG)

HSP 1 Score: 113 bits (283), Expect = 9.090e-27
Identity = 61/145 (42.07%), Postives = 96/145 (66.21%), Query Frame = 0
Query:    1 MYLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALRS 145
            MYL+ P +EIT++EFE+ ALDRLQ+L+  E  K          RN+  E +K+ ++  ++K++ M + +     + RRKD ISHF+LRLAYCRS++ R WFL QE ALF++RL E +  +   F+++ +L + VV AE+K A+++
Sbjct:   38 MYLDPPTDEITIEEFEIFALDRLQVLKAIESAKL---------RNLNDEQFKKDVQYAVDKYLPMHSNTAFDLISERRKDHISHFVLRLAYCRSDESREWFLRQEAALFKYRLLEENVKDRSAFLESAKLDWHVVTAEQKQAIQN 173          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: A0A8H7PVV1_MORIS (DNA primase large subunit n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PVV1_MORIS)

HSP 1 Score: 110 bits (275), Expect = 1.210e-25
Identity = 63/144 (43.75%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    2 YLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALRS 145
            YL  P  EI++++FE  ALDRLQ+L+  E+            RN + ED++R ++   ++H++M       A   RRKD +SHFILRLAYCRSEDLR WFL QE ALFRHR E  S  E + F+    + +KVV  E K  +++
Sbjct:   38 YLRPPPAEISVEDFERFALDRLQVLKTIEN---------ATLRNKKNEDFRREMERVSSEHLRMRPGHTKEAMEDRRKDHVSHFILRLAYCRSEDLRSWFLRQECALFRHRFELESRKEKETFLKTLDINWKVVSQEDKMNMKA 172          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.400e-25
Identity = 65/145 (44.83%), Postives = 89/145 (61.38%), Query Frame = 0
Query:    1 MYLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALRS 145
            +Y  AP  EITL+EFEL ALDRLQILR  E L         R R ++G++++  L+E ++  M M+  + +  R    KD ISHFILR+AYC++EDLRRWFL  E+ LFR RLE L   E  +F++   L + VV  E    L++
Sbjct:   27 LYNTAPQAEITLEEFELYALDRLQILRSIESL---------RLRGMKGDEFRMKLEEIISACMPMTLGTAEEVR----KDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRLKA 158          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: A0A068RQP2_9FUNG (DNA primase large subunit n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RQP2_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 6.780e-25
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    2 YLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARA--GRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALR 144
            Y E P  EIT++EFEL ALDRLQ+L+  E             RN RG DYKR + + L K + M +    S +    RRKD +SHF+LRLAYCRSED R WFL QE ALF++R E+ +  E  +F+   +L +  ++ E K  +R
Sbjct:   45 YTEPPPLEITIEEFELFALDRLQVLKTLES---------AALRNKRGPDYKRQVDQALEKFLPMKSNLTQSTKLLEERRKDHVSHFVLRLAYCRSEDSRAWFLRQECALFKYRFEQETLEEKKKFVAGLKLSWTPLEPEEKRRIR 180          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: UPI000CDA9ACB (DNA primase large subunit isoform X2 n=2 Tax=Passeriformes TaxID=9126 RepID=UPI000CDA9ACB)

HSP 1 Score: 102 bits (255), Expect = 4.410e-24
Identity = 68/144 (47.22%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    2 YLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGED-YKRALKECLNK-HMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAAL 143
            YLE P E I+L EFE +A+DRL++L+  E+L  S          VR  D YK  L+  L K       L+ED   A RRKD ISHFILRLAYC+SEDLRRWFL QE  LFR+R  EL+ + M +F++   L F+ +  + K  L
Sbjct:   29 YLEPPMESISLVEFESLAIDRLKLLKVVENLGVSY---------VRSSDTYKSKLEAELRKLKFPYRALAEDDYEA-RRKDHISHFILRLAYCQSEDLRRWFLQQEMDLFRYRFNELTESLMQKFLEHVNLSFEAIGEDLKNEL 162          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: A0A167R3V1_PHYB8 (DNA primase large subunit n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167R3V1_PHYB8)

HSP 1 Score: 106 bits (264), Expect = 4.580e-24
Identity = 65/149 (43.62%), Postives = 87/149 (58.39%), Query Frame = 0
Query:    2 YLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMS-------TLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAAL 143
            YL  P  EIT++EFEL ALDRLQ+L+  E             RN+RG + +R +   L +H+ +        TL ED     RRKD ISH++LRLAYCRSE+LR WFL QE  LFR+R E+    E  RF+    L +K++D E K ++
Sbjct:   39 YLAPPSTEITIEEFELFALDRLQVLKTLETASL---------RNLRGAELERVMNPVLEQHLPLKSNISQSPTLYED-----RRKDHISHYVLRLAYCRSEELRVWFLRQECNLFRYRFEQEGQEEKRRFLTELNLNWKILDQETKDSI 173          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: F2U7T0_SALR5 (DNA primase large subunit n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7T0_SALR5)

HSP 1 Score: 106 bits (264), Expect = 5.220e-24
Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    2 YLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGEDYKRALKECLNKHMKMSTLSEDSARAG-RRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAAL 143
            YL+ P EEI L+EFE +A+ RL  L+  E  K    +        RG D+ + + +   KH+ ++   ++  R   RR+D +SHFILRLAYCR+EDLRRWFLTQET LFRHRL       +++ +  + + FK VDA  K AL
Sbjct:   38 YLQPPQEEIGLEEFEELAVARLHALKACETAKVRYPS--------RGSDFTQLISKAERKHLPVTESGDNDIRYDQRRRDYLSHFILRLAYCRTEDLRRWFLTQETELFRHRLMHQDTQSVNKLLALNNMQFKAVDAGVKQAL 172          
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Match: UPI000528153A (DNA primase large subunit-like n=1 Tax=Pterocles gutturalis TaxID=240206 RepID=UPI000528153A)

HSP 1 Score: 102 bits (255), Expect = 6.190e-24
Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    2 YLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGED-YKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAAL 143
            YLE P E I+L EFE  A+DRL++L+  E+L  S          VRG D YK  L+  L + +    L+ED   A RRKD ISHFILRLAYC+SEDLRRWFL QE  L R+R  EL+ +   +F++   L F+ V  + K  L
Sbjct:   10 YLEPPTESISLVEFESFAIDRLRLLKVVENLGVSY---------VRGSDLYKTKLEGELRRLIPYKALAEDDYEA-RRKDHISHFILRLAYCQSEDLRRWFLQQEMDLLRYRFHELTDSLRQKFLEHVNLSFEAVSEDLKNEL 142          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106241.509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG5_ECTSI6.650e-6074.48DNA primase large subunit n=2 Tax=Ectocarpus TaxID... [more]
A0A835YS26_9STRA5.950e-3957.24DNA primase large subunit n=1 Tax=Tribonema minus ... [more]
A0A1X2GGF2_9FUNG9.090e-2742.07DNA primase large subunit n=1 Tax=Hesseltinella ve... [more]
A0A8H7PVV1_MORIS1.210e-2543.75DNA primase large subunit n=1 Tax=Mortierella isab... [more]
W7TRK8_9STRA5.400e-2544.83DNA primase large subunit n=2 Tax=Monodopsidaceae ... [more]
A0A068RQP2_9FUNG6.780e-2544.14DNA primase large subunit n=2 Tax=Lichtheimia TaxI... [more]
UPI000CDA9ACB4.410e-2447.22DNA primase large subunit isoform X2 n=2 Tax=Passe... [more]
A0A167R3V1_PHYB84.580e-2443.62DNA primase large subunit n=1 Tax=Phycomyces blake... [more]
F2U7T0_SALR55.220e-2443.36DNA primase large subunit n=1 Tax=Salpingoeca rose... [more]
UPI000528153A6.190e-2446.85DNA primase large subunit-like n=1 Tax=Pterocles g... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.930.80coord: 1..145
e-value: 6.8E-41
score: 142.3
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 1..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106241contigH-elongata_contig106241:324..1911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106241.509.1mRNA_H-elongata_contig106241.509.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106241 324..1911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106241.509.1 ID=prot_H-elongata_contig106241.509.1|Name=mRNA_H-elongata_contig106241.509.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
MYLEAPFEEITLDEFELMALDRLQILRKNEDLKASSRTHGGRARNVRGED
YKRALKECLNKHMKMSTLSEDSARAGRRKDVISHFILRLAYCRSEDLRRW
FLTQETALFRHRLEELSPTEMDRFIDAHRLPFKVVDAERKAALRS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc