prot_H-elongata_contig105796.479.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105796.479.1
Unique Nameprot_H-elongata_contig105796.479.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
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BLAST of mRNA_H-elongata_contig105796.479.1 vs. uniprot
Match: D7G6P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P9_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 3.310e-7
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    1 STKFSDFEKLENLEEFSGRLNKGHSRIGSEHTVISVC 37
            STKF     L+NLE+ SGRLN+GHS IGSEHTVIS C
Sbjct:  102 STKFD----LDNLEDLSGRLNEGHSHIGSEHTVISAC 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105796.479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6P9_ECTSI3.310e-770.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105796contigH-elongata_contig105796:2125..2235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105796.479.1mRNA_H-elongata_contig105796.479.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105796 2125..2235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105796.479.1 ID=prot_H-elongata_contig105796.479.1|Name=mRNA_H-elongata_contig105796.479.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
STKFSDFEKLENLEEFSGRLNKGHSRIGSEHTVISVC
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