prot_H-elongata_contig105773.476.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105773.476.1
Unique Nameprot_H-elongata_contig105773.476.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length242
Homology
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: D6PWV8_9PHAE (PXMP2/4 family protein 2 (Fragment) n=5 Tax=Fucus TaxID=3011 RepID=D6PWV8_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 6.230e-97
Identity = 142/212 (66.98%), Postives = 171/212 (80.66%), Query Frame = 0
Query:   27 GDSVSTSLPTPGAQK-GLLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLS 237
            GDS+S+S+ +   +K G+L+ Y+RVLD+RPL TK++TSGVICAIGDV+AQALS+ N+A+ P  L  F  ALEF+RL IYG LGAVWVAP+ HYWFD LE+  KG   P +TF GKM KALKMV +DQ IGAP VN+GFMFLF LATA+ +G   TSA +KA   VRD I GTMLVCW+LWP+ANLINFA+VPPKLRVLFLNFVGLGWN++LS
Sbjct:    1 GDSMSSSVGSSDVEKPGVLNKYLRVLDRRPLETKMITSGVICAIGDVVAQALSFSNSAVTPNNLRSFANALEFKRLAIYGALGAVWVAPLCHYWFDALEDFFKGDNNPLDTFKGKMIKALKMVTVDQGIGAPVVNAGFMFLFTLATAMVSGTSPTSAFKKAGRFVRDNIKGTMLVCWRLWPVANLINFAYVPPKLRVLFLNFVGLGWNIFLS 212          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: D7G6L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L5_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.210e-96
Identity = 150/245 (61.22%), Postives = 185/245 (75.51%), Query Frame = 0
Query:    1 MLSRARGGKLWRRPAVAVPVEIDDHIGDSVSTSLPTPGAQKGLLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKA----PSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSAAVN 241
            ++ RARGG L RR  VAVP    D+ G  V +     G   GLL++Y+R LD +P+ TK+VTSGVIC IGD+MAQAL++  AA    TLG FL ALEF+RL IYG+LGA+W+APV+HYWFD LE  TK  KA    P+ +F+ +M KALKMV +DQ+IGAP +N+GFMFLF  ATAL +G     + +KA ++V++GIW TMLVCWKLWPIAN+INFAFVP KLRVLFLNFVGLGWN+YLSAAVN
Sbjct:   54 VVRRARGGVLLRRRGVAVPAP--DNGGLVVESGNKNGG--DGLLASYLRALDTKPIITKVVTSGVICGIGDIMAQALAFKTAATESFTLGSFLAALEFKRLAIYGVLGALWIAPVVHYWFDALEAATKDKKAVAGAPAPSFAMRMFKALKMVTLDQTIGAPLINAGFMFLFTFATALTSGAGGIESGKKAGTMVKNGIWSTMLVCWKLWPIANMINFAFVPAKLRVLFLNFVGLGWNIYLSAAVN 294          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A6H5K3K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K4_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.210e-73
Identity = 147/350 (42.00%), Postives = 180/350 (51.43%), Query Frame = 0
Query:    1 MLSRARGGKLWRRPAVAVPVEIDDHIGDSVSTSLPTPGAQKGLLSAYMRVLDKRPLPTKIV---TSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYG------------------------------------------------------------------------------------------------------LLGAVWVAPVIHYWFDILENLTKGTKA----PSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSAAVN 241
            ++ RARGG L RR  VAVP    D  G  V +         GLL++Y+R LD +PL TK+    TSGVIC IGD+MAQAL++  AA    +LG FL ALEF+RL IYG                                                                                                      +LGA+W+APV+HYWFD LE   K  KA    P+ +FS +M KALKMV++DQ IGAP VN+GFMFLF  ATAL +G     + +KA  +V++GIWGTMLVCWKLWPIAN+INF +VP KLRVLF+NFVGLGWN+YLSAAVN
Sbjct:   65 VVRRARGGALLRRRGVAVPAP--DQSGLVVESG--DKNGADGLLASYLRALDTKPLITKVYQVFTSGVICGIGDIMAQALAFKTAATESFSLGSFLAALEFKRLAIYGETCLRVLPRMGIFSRLFSFCLGSSGRGVIHRHLYLRWCRERKIYRWRINKLEVEETRVEFQEEMAVNDKKFSELIEAMGTPKDAKGRDQAGSRNHRRVGKAGVLGALWIAPVVHYWFDTLEAAFKDKKAVPGAPAPSFSTRMVKALKMVILDQGIGAPLVNAGFMFLFTFATALTSGTGGIESGKKAGIMVKNGIWGTMLVCWKLWPIANMINFLYVPVKLRVLFMNFVGLGWNIYLSAAVN 410          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A835YM13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM13_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.320e-48
Identity = 86/215 (40.00%), Postives = 131/215 (60.93%), Query Frame = 0
Query:   38 GAQKG---LLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSG--------KMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSAAVN 241
            GA +G   ++  YM +L++RPL TK+ T+ +IC +GDV  QA+       G  +L    RA + +R V+YG +GA+++AP+ HYW+  L++     K P+    G        ++  ALKM+ IDQ+I +P VNSGF+F +A  T LA G    +A+   S+ V+  +W T++  WK+WP AN +NF FVP +LR LFL+ VG+ WN+ LS+  N
Sbjct:    6 GAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAM-------GAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAI--VKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 211          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A836CMN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMN9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 8.090e-34
Identity = 82/213 (38.50%), Postives = 116/213 (54.46%), Query Frame = 0
Query:   47 YMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGF--LR-ALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSA-------VRKASSLVRDG-----------IWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSA 238
            Y+  L +RPLPTK+VTS ++C +GD + Q L          T GGF  LR AL+F+RLV+Y  +G ++VAP      D++         P      K  KAL M  ID ++ +P +N GF+++F  A  LA+G   T A       ++  ++L+R             +W T+L  WK+WP+AN  NF  VPP LRVL+LN VGL W+  LSA
Sbjct:   83 YLATLKRRPLPTKMVTSAIVCGLGDAICQML----------TAGGFGALRHALDFRRLVLYSTMGGLYVAP------DMV---------PGKVTLVKAKKALNMTFID-TLASPLINGGFLYVFTAANCLASGAAVTGAAGAGLEKLQVLANLMRIANLNNIVDKNTCLWPTLLASWKMWPLANFFNFLLVPPHLRVLYLNVVGLVWHTVLSA 269          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A7S2SVB6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVB6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.950e-28
Identity = 68/205 (33.17%), Postives = 109/205 (53.17%), Query Frame = 0
Query:   39 AQKGLLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMV--ATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSAAVN 241
            A   L   Y R L+KRP+ TK+ T  VI AIGD++AQ ++     + P+            R+  Y +   +++ P +HYWF+ ++ + K    P+     K  + L    +DQ++G   +N GF F FA+     +G +   T  + +    +   +W T+L  W+LWP+AN +NF FVP K RVLF NFV + W++YLS  ++
Sbjct:   71 AGPSLWERYDRQLEKRPIFTKMWTCLVIGAIGDILAQRITTKFVDMDPM------------RIFQYSVAQFLFLGPSLHYWFNFIDYVGK---LPAIAKLKKSVRVLVQTFVDQTVGVVTINGGFFFFFAVLQNTLDGTLFPLTRTLGQGWEKITSLMWVTLLANWRLWPLANWVNFQFVPLKYRVLFSNFVAVFWSIYLSVVMH 260          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: I7MJ57_TETTS (Mpv17/PMP22 family protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MJ57_TETTS)

HSP 1 Score: 106 bits (264), Expect = 7.330e-25
Identity = 64/195 (32.82%), Postives = 93/195 (47.69%), Query Frame = 0
Query:   43 LLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLS 237
            +   Y  +L K PL TK VTSG +  +GD + Q +   N            +A  F+R      +G+V+ APV+H W+  L    +          G++ K L  +  DQ+I        F F F     +    V   ++ K  + +++    TM+  WKLWP A +INF+ VP   RVLF NFVGL WN+YLS
Sbjct:    3 IFKGYNNLLTKYPLSTKCVTSGFMFGLGDAICQLVFEEN------------KAYNFRRTANIAFVGSVFAAPVLHKWYGFLPGFCERNIFYKYPKMGQISKTLIPMAFDQTI--------FAFSFTCYFFMVVNYVEYQSIEKGITSIKEKSLETMIANWKLWPAAQMINFSIVPIPYRVLFANFVGLIWNIYLS 177          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A7S1XPH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPH0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.660e-24
Identity = 67/218 (30.73%), Postives = 106/218 (48.62%), Query Frame = 0
Query:   21 EIDDHIGDSVSTSLPTPGAQKGLLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSA 238
            ++   +   ++++LP P     L   Y+R L+ RP+P K+ T+  +  I D+++QAL+       P  L  FL  +  Q         A ++ P +HY F + E +  G K       G   K L MV +DQ++GA F  + F  +F        G      + KA + V   +W  +L  WK+WP+AN INF FVP +LR+ F N V   + + LS+
Sbjct:   90 KVVSELEPEMTSALPAPSRASRLWRGYVRRLEARPIPMKVATAMCLMCISDLVSQALTP-----APFNLPRFLAFVTTQ---------AFFMTPCLHYQFAMFEAI--GNKVERRF--GTDAKPLAMVAVDQTLGALFAFTAFFLIFTFWDNAFRGFPEGGVLGKAWAKVTGTLWSALLANWKIWPLANFINFKFVPLQLRIPFANLVACCFGIILSS 289          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A7S4A5T2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5T2_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.100e-24
Identity = 70/234 (29.91%), Postives = 107/234 (45.73%), Query Frame = 0
Query:    4 RARGGKLWRRPAVAVPVEIDDHIGDSVSTSLPTPGAQKGLLSAYMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLS 237
            R RG  L    A A  +   +    + S    T   + G+L AY  +L +RPLPTK+ +SG   A+GD +AQ +  V     P            +R +++  +G  + AP++H W+  L  L K   A S  F+ +    L++++ +QSIGA   N GF + +A       G      +  AS       W  M   W +WP+ + +N A VP   RVLF+N   + W   LS
Sbjct:    2 RRRGASLLFAAATAAALSPPNRSVKAPSARQATTAVRGGVLRAYDSLLKRRPLPTKMASSGAASALGDALAQTI--VGNTYDP------------RRTLVFAAIGVFYFAPLLHLWYKALHKLEKSGVA-SGRFTRRQIIGLQLLM-NQSIGAMCANGGFFYAYAAFDRWLPGGGNAPILETASKAFHRKFWRIMKANWVVWPLPSFVNLALVPLDYRVLFMNCFAVVWKCVLS 219          
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Match: A0A8J6CEC6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CEC6_DIALT)

HSP 1 Score: 105 bits (263), Expect = 7.780e-24
Identity = 64/203 (31.53%), Postives = 98/203 (48.28%), Query Frame = 0
Query:   47 YMRVLDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQRLVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVIDQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTM--------LVCWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSAAVN 241
            Y+ +L+  P+ TK+ TS V+ A+GDV+AQ            TL   + A   +RL++   +   + +P +HYW++  +      K    T+    G AL  + +DQ +  P    GF  +FALA A ++   A  A    + ++  G+   M        L  WK+W +  L+NF FVPP LRV F N V + WN  LS   N
Sbjct:   86 YLELLEAYPMRTKMATSAVLSAVGDVLAQ------------TLDKSVAAFSLRRLLVLVSVNIFYFSPALHYWYNFFDVAVGKLKLRPGTW----GSALAYLALDQLVNTPLTLLGFFHVFALANAASHA--ALGAPMPGAGVLLAGVRAKMGVEYANALLANWKVWALPQLVNFMFVPPSLRVGFANLVAIVWNAILSMIAN 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105773.476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D6PWV8_9PHAE6.230e-9766.98PXMP2/4 family protein 2 (Fragment) n=5 Tax=Fucus ... [more]
D7G6L5_ECTSI1.210e-9661.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3K4_9PHAE1.210e-7342.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YM13_9STRA5.320e-4840.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMN9_9STRA8.090e-3438.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SVB6_9STRA1.950e-2833.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I7MJ57_TETTS7.330e-2532.82Mpv17/PMP22 family protein n=1 Tax=Tetrahymena the... [more]
A0A7S1XPH0_9STRA1.660e-2430.73Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4A5T2_9STRA2.100e-2429.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J6CEC6_DIALT7.780e-2431.53Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 189..237
e-value: 3.4E-19
score: 68.8
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 43..237
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 43..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 184..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..216
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 101..120
NoneNo IPR availableTMHMMTMhelixcoord: 223..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105773contigH-elongata_contig105773:193..1270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105773.476.1mRNA_H-elongata_contig105773.476.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105773 193..1270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105773.476.1 ID=prot_H-elongata_contig105773.476.1|Name=mRNA_H-elongata_contig105773.476.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
MLSRARGGKLWRRPAVAVPVEIDDHIGDSVSTSLPTPGAQKGLLSAYMRV
LDKRPLPTKIVTSGVICAIGDVMAQALSYVNAAIGPVTLGGFLRALEFQR
LVIYGLLGAVWVAPVIHYWFDILENLTKGTKAPSNTFSGKMGKALKMVVI
DQSIGAPFVNSGFMFLFALATALANGMVATSAVRKASSLVRDGIWGTMLV
CWKLWPIANLINFAFVPPKLRVLFLNFVGLGWNMYLSAAVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22