prot_H-elongata_contig10576.475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10576.475.1
Unique Nameprot_H-elongata_contig10576.475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
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BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot
Match: A0A6H5JPR8_9PHAE (acidPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR8_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.400e-26
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0 
Query:    1 MSAILIGISGIRDYMHHPDDVLAGLALGAASAYWSFRFLVVMPFRHEIGSPQWRTTPKWVKEEEREWAQEEVEVMRLCPLKSRKHR 86
            MSAIL+G+S IR+Y H PDDVL G  +G A+A+W+F+F V++PFRHEIGSP+W+  PKW+ EEE+ W +EE E +RLC  + R+ R
Sbjct:  229 MSAILVGVSRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRW-EEEDEELRLCGWRRRRAR 313
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BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot
Match: D7FPN4_ECTSI (acidPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN4_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.150e-25
Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = 0 
Query:    1 MSAILIGISGIRDYMHHPDDVLAGLALGAASAYWSFRFLVVMPFRHEIGSPQWRTTPKWVKEEEREWAQEEVEVMRLCPLKSRKHR 86
            MSAILIG++ IR+Y H PDDVL G  +G A+A+W+F F V++PFRHEIGSP+W+  PKW+ EEE+ W +EE E +RLC  + R+ R
Sbjct:  325 MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRW-EEEDEELRLCGWRRRRAR 409
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPR8_9PHAE1.400e-2656.98acidPPc domain-containing protein n=1 Tax=Ectocarp... [more]
D7FPN4_ECTSI1.150e-2556.98acidPPc domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.144.10coord: 1..71
e-value: 4.6E-8
score: 34.4
NoneNo IPR availablePANTHERPTHR10165LIPID PHOSPHATE PHOSPHATASEcoord: 2..78
NoneNo IPR availablePANTHERPTHR10165:SF35RE23632Pcoord: 2..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..139
IPR000326Phosphatidic acid phosphatase type 2/haloperoxidasePFAMPF01569PAP2coord: 2..38
e-value: 6.5E-7
score: 29.2
IPR036938Phosphatidic acid phosphatase type 2/haloperoxidase superfamilySUPERFAMILY48317Acid phosphatase/Vanadium-dependent haloperoxidasecoord: 3..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10576contigH-elongata_contig10576:5949..7066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10576.475.1mRNA_H-elongata_contig10576.475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10576 5938..7146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10576.475.1 ID=prot_H-elongata_contig10576.475.1|Name=mRNA_H-elongata_contig10576.475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
MSAILIGISGIRDYMHHPDDVLAGLALGAASAYWSFRFLVVMPFRHEIGS
PQWRTTPKWVKEEEREWAQEEVEVMRLCPLKSRKHRGRIRYESADEERVV
EPTVPVLALAAASTEVPIPRRALEADVDAAIEKYDMSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000326P_Acid_Pase_2/haloperoxidase
IPR036938P_Acid_Pase_2/haloperoxi_sf