prot_H-elongata_contig10576.475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig10576.475.1
Unique Name	prot_H-elongata_contig10576.475.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	140

Homology

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BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot
Match: A0A6H5JPR8_9PHAE (acidPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR8_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.400e-26
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0

Query:    1 MSAILIGISGIRDYMHHPDDVLAGLALGAASAYWSFRFLVVMPFRHEIGSPQWRTTPKWVKEEEREWAQEEVEVMRLCPLKSRKHR 86
            MSAIL+G+S IR+Y H PDDVL G  +G A+A+W+F+F V++PFRHEIGSP+W+  PKW+ EEE+ W +EE E +RLC  + R+ R
Sbjct:  229 MSAILVGVSRIREYWHRPDDVLVGFIMGFAAAHWAFQFAVLLPFRHEIGSPEWKMNPKWLDEEEQRW-EEEDEELRLCGWRRRRAR 313

[Close]

BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot
Match: D7FPN4_ECTSI (acidPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN4_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.150e-25
Identity = 49/86 (56.98%), Postives = 66/86 (76.74%), Query Frame = 0

Query:    1 MSAILIGISGIRDYMHHPDDVLAGLALGAASAYWSFRFLVVMPFRHEIGSPQWRTTPKWVKEEEREWAQEEVEVMRLCPLKSRKHR 86
            MSAILIG++ IR+Y H PDDVL G  +G A+A+W+F F V++PFRHEIGSP+W+  PKW+ EEE+ W +EE E +RLC  + R+ R
Sbjct:  325 MSAILIGVTRIREYWHRPDDVLVGFIMGFAAAHWAFHFAVLLPFRHEIGSPEWKMNPKWLDEEEQRW-EEEDEELRLCGWRRRRAR 409

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot

BLAST of mRNA_H-elongata_contig10576.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JPR8_9PHAE	1.400e-26	56.98	acidPPc domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FPN4_ECTSI	1.150e-25	56.98	acidPPc domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.144.10		coord: 1..71 e-value: 4.6E-8 score: 34.4
None	No IPR available	PANTHER	PTHR10165	LIPID PHOSPHATE PHOSPHATASE	coord: 2..78
None	No IPR available	PANTHER	PTHR10165:SF35	RE23632P	coord: 2..78
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..44
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 45..139
IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	PFAM	PF01569	PAP2	coord: 2..38 e-value: 6.5E-7 score: 29.2
IPR036938	Phosphatidic acid phosphatase type 2/haloperoxidase superfamily	SUPERFAMILY	48317	Acid phosphatase/Vanadium-dependent haloperoxidase	coord: 3..46

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig10576	contig	H-elongata_contig10576:5949..7066 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig10576.475.1	mRNA_H-elongata_contig10576.475.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig10576 5938..7146 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig10576.475.1 ID=prot_H-elongata_contig10576.475.1|Name=mRNA_H-elongata_contig10576.475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
MSAILIGISGIRDYMHHPDDVLAGLALGAASAYWSFRFLVVMPFRHEIGS
PQWRTTPKWVKEEEREWAQEEVEVMRLCPLKSRKHRGRIRYESADEERVV
EPTVPVLALAAASTEVPIPRRALEADVDAAIEKYDMSPV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000326	P_Acid_Pase_2/haloperoxidase
IPR036938	P_Acid_Pase_2/haloperoxi_sf