prot_H-elongata_contig105626.466.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105626.466.1
Unique Nameprot_H-elongata_contig105626.466.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: D8LRZ5_ECTSI (DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ5_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.620e-31
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 0
Query:    2 LGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            L EDGSC+VRDNGRGIPC++HPRTKKSALETV+TVLHAGGKFGGDESGYKVSGGLHGVGVSV
Sbjct:   99 LEEDGSCTVRDNGRGIPCDIHPRTKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 160          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A7S1XU47_9STRA (DNA topoisomerase 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU47_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.380e-27
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MLGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
             L EDGSCSVRDNGRGIP E+H +T KSALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSV
Sbjct:  112 FLHEDGSCSVRDNGRGIPTEVHSKTGKSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSV 174          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A835Z3N6_9STRA (DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.170e-27
Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = 0
Query:    2 LGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            L  DGSC+V DNGRGIPC LHP+T KSALETVMTVLHAGGKFGGD SGYKVSGGLHGVG+SV
Sbjct:   90 LETDGSCTVSDNGRGIPCALHPQTGKSALETVMTVLHAGGKFGGDGSGYKVSGGLHGVGISV 151          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A1F5P9T6_9BACT (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_02_FULL_46_11 TaxID=1817832 RepID=A0A1F5P9T6_9BACT)

HSP 1 Score: 110 bits (276), Expect = 8.380e-27
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MLGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            +L EDGS +VRDNGRGIP E+H +TKKSALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSV
Sbjct:  110 ILNEDGSVTVRDNGRGIPVEVHKQTKKSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSV 172          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A1F7BS31_9BACT (DNA gyrase subunit B n=1 Tax=Candidatus Peribacteria bacterium RIFCSPHIGHO2_02_FULL_51_15 TaxID=1801919 RepID=A0A1F7BS31_9BACT)

HSP 1 Score: 107 bits (268), Expect = 9.910e-26
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MLGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            ML  D S SV DNGRGIP ++HP+TKKSALETV+T+LHAGGKFGGD+SGYKVSGGLHGVG SV
Sbjct:   65 MLHNDNSISVEDNGRGIPVDIHPKTKKSALETVLTMLHAGGKFGGDDSGYKVSGGLHGVGASV 127          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A7S3MEP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEP9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.820e-25
Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    5 DGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            D S  V+DNGRGIPC  HP T KS+LETV+ VLHAGGKFGG+ESGYKVSGGLHGVG+SV
Sbjct:   42 DNSIEVQDNGRGIPCAPHPSTGKSSLETVLCVLHAGGKFGGEESGYKVSGGLHGVGISV 100          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: K1YCH0_9BACT (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=uncultured bacterium (gcode 4) TaxID=1234023 RepID=K1YCH0_9BACT)

HSP 1 Score: 105 bits (261), Expect = 2.320e-25
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    2 LGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            L ED S SV DNGRGIP ++HP+T KSALETVMTVLHAGGKFGG ESGYKVSGGLHGVG SV
Sbjct:   63 LHEDNSVSVEDNGRGIPVDIHPKTGKSALETVMTVLHAGGKFGGAESGYKVSGGLHGVGASV 124          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: T2RDJ1_PAES9 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211) TaxID=1292036 RepID=T2RDJ1_PAES9)

HSP 1 Score: 99.0 bits (245), Expect = 3.370e-25
Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    2 LGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            + EDGS  VRDNGRGIP E+HP+T KS LETV+TVLHAGGKFGG   GYKVSGGLHGVGVSV
Sbjct:   62 INEDGSIFVRDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFGG--GGYKVSGGLHGVGVSV 121          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A846DTV8_9CYAN (DNA topoisomerase IV subunit B (Fragment) n=1 Tax=Moorena sp. SIO2B7 TaxID=2607823 RepID=A0A846DTV8_9CYAN)

HSP 1 Score: 99.0 bits (245), Expect = 4.680e-25
Identity = 50/62 (80.65%), Postives = 53/62 (85.48%), Query Frame = 0
Query:    2 LGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            L  DGS SV D+GRGIP ++HP TKKSALETVMTVLHAGGKFGG   GYKVSGGLHGVGVSV
Sbjct:   79 LNPDGSVSVTDDGRGIPTDIHPTTKKSALETVMTVLHAGGKFGG--GGYKVSGGLHGVGVSV 138          
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK)

HSP 1 Score: 105 bits (263), Expect = 4.700e-25
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MLGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGYKVSGGLHGVGVSV 63
            ++  DGS SV+DNGRGIPCE+HP+T +SALETV+TVLHAGGKFGGD SGYKVSGGLHGVGVSV
Sbjct:   67 IIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLTVLHAGGKFGGD-SGYKVSGGLHGVGVSV 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105626.466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRZ5_ECTSI3.620e-3191.94DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S1XU47_9STRA2.380e-2785.71DNA topoisomerase 2 n=1 Tax=Phaeomonas parva TaxID... [more]
A0A835Z3N6_9STRA3.170e-2785.48DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID... [more]
A0A1F5P9T6_9BACT8.380e-2784.13DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A1F7BS31_9BACT9.910e-2679.37DNA gyrase subunit B n=1 Tax=Candidatus Peribacter... [more]
A0A7S3MEP9_9STRA1.820e-2577.97Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
K1YCH0_9BACT2.320e-2582.26DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
T2RDJ1_PAES93.370e-2579.03Histidine kinase-, DNA gyrase B-, and HSP90-like A... [more]
A0A846DTV8_9CYAN4.680e-2580.65DNA topoisomerase IV subunit B (Fragment) n=1 Tax=... [more]
A0A7S3XY21_HETAK4.700e-2580.95DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00418TPI2FAMILYcoord: 9..22
score: 56.45
coord: 54..66
score: 47.64
NoneNo IPR availablePANTHERPTHR45866FAMILY NOT NAMEDcoord: 2..63
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 5..63
e-value: 2.2E-7
score: 31.4
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 1..64
e-value: 1.7E-23
score: 85.3
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 4..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105626contigH-elongata_contig105626:118..318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105626.466.1mRNA_H-elongata_contig105626.466.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105626 106..318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105626.466.1 ID=prot_H-elongata_contig105626.466.1|Name=mRNA_H-elongata_contig105626.466.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MLGEDGSCSVRDNGRGIPCELHPRTKKSALETVMTVLHAGGKFGGDESGY
KVSGGLHGVGVSVRGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003594HATPase_C
IPR036890HATPase_C_sf