prot_H-elongata_contig105362.444.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105362.444.1
Unique Nameprot_H-elongata_contig105362.444.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length177
Homology
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.250e-52
Identity = 123/195 (63.08%), Postives = 127/195 (65.13%), Query Frame = 0
Query:   12 RCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGG---------------RR--------------------GSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNLKV 171
            +   SVREALSD+LAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ ES+ G   G                     RR                    G  G   R I Q           VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVN K+
Sbjct: 2900 KLADSVREALSDMLAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQQESSAGDGSGXXXXXXXXXXXXXXXXXXXXXRRTXXXXXXXXXXXXXXXXXXAGGLGALRRDIVQ-----------VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNTKL 3083          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A836CNJ7_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 8.420e-27
Identity = 75/151 (49.67%), Postives = 100/151 (66.23%), Query Frame = 0
Query:   19 EALSDILAVAAGFLPPWVDALL-SGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKA---VLEFRFAGEKGLGAGVTASFYSAVAAELQRR 165
            +A++D LAVAA  LPPW++A++  G+ FLLPL LR R+F+S +FGV RS+A+LQ ++A    G S   GG+   +GG+  R +            VSR  LL+HA+Q+M  YT   +   VLEFRF GE+GLGAGVTASFYSAVAA +  R
Sbjct:  126 QAMADELAVAANALPPWLEAIVCGGYGFLLPLGLRRRFFQSCSFGVNRSIAWLQTQAAAAAAGAS---GGQ--PSGGRLLRRDVVQ---------VSRDHLLEHAQQIMLAYTTPTSLASVLEFRFQGERGLGAGVTASFYSAVAAAMHAR 262          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: D8LBS8_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS8_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 5.120e-24
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0
Query:  113 VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNLKV 171
            VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVN K+
Sbjct: 1426 VSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNTKL 1484          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A151K1J5_9HYME (E3 ubiquitin-protein ligase n=1 Tax=Trachymyrmex septentrionalis TaxID=34720 RepID=A0A151K1J5_9HYME)

HSP 1 Score: 95.9 bits (237), Expect = 1.010e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0
Query:    9 TSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNL 169
            TS++ T  + + + D LA+AAG LP W + L    PFLLP + R  YF   AFG +RS+ +LQ +    ++     G   R     ++R + +  HE    PR     +LL  AEQV+ ++   K++LE  F GE+G G G T  F++ VAAELQR+ +NL
Sbjct: 1948 TSKKITNKIVQQIQDPLALAAGALPNWCEELARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQRDAILERQRAPGLSPRRDDSHEFR-VGRLKHERVSVPRG---EKLLDWAEQVLKVHASRKSILEVAFVGEEGTGLGPTLEFFALVAAELQRKDLNL 2104          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: UPI00084EDDB7 (E3 ubiquitin-protein ligase HECTD1 isoform X2 n=1 Tax=Trachymyrmex septentrionalis TaxID=34720 RepID=UPI00084EDDB7)

HSP 1 Score: 95.9 bits (237), Expect = 1.010e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0
Query:    9 TSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNL 169
            TS++ T  + + + D LA+AAG LP W + L    PFLLP + R  YF   AFG +RS+ +LQ +    ++     G   R     ++R + +  HE    PR     +LL  AEQV+ ++   K++LE  F GE+G G G T  F++ VAAELQR+ +NL
Sbjct: 1988 TSKKITNKIVQQIQDPLALAAGALPNWCEELARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQRDAILERQRAPGLSPRRDDSHEFR-VGRLKHERVSVPRG---EKLLDWAEQVLKVHASRKSILEVAFVGEEGTGLGPTLEFFALVAAELQRKDLNL 2144          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: UPI00084F35E1 (E3 ubiquitin-protein ligase HECTD1 isoform X1 n=1 Tax=Trachymyrmex septentrionalis TaxID=34720 RepID=UPI00084F35E1)

HSP 1 Score: 95.9 bits (237), Expect = 1.010e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0
Query:    9 TSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNL 169
            TS++ T  + + + D LA+AAG LP W + L    PFLLP + R  YF   AFG +RS+ +LQ +    ++     G   R     ++R + +  HE    PR     +LL  AEQV+ ++   K++LE  F GE+G G G T  F++ VAAELQR+ +NL
Sbjct: 2000 TSKKITNKIVQQIQDPLALAAGALPNWCEELARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQRDAILERQRAPGLSPRRDDSHEFR-VGRLKHERVSVPRG---EKLLDWAEQVLKVHASRKSILEVAFVGEEGTGLGPTLEFFALVAAELQRKDLNL 2156          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A6P3WWV4_DINQU (E3 ubiquitin-protein ligase n=1 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3WWV4_DINQU)

HSP 1 Score: 95.1 bits (235), Expect = 1.880e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0
Query:    9 TSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNL 169
            TS++ T  + + + D LA+AAG LP W + L    PFLLP + R  YF   AFG +RS+ +LQ +    ++     G   R     ++R + +  HE    PR     +LL  AEQV+ ++   K++LE  F GE+G G G T  F++ VAAELQRR ++L
Sbjct: 1990 TSKKITNKIVQQIQDPLALAAGALPNWCEELARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQRDAILERQRAPGLSPRRDDSHEFR-VGRLKHERVSVPRG---DKLLDWAEQVLKVHASRKSILEVAFVGEEGTGLGPTLEFFALVAAELQRRDLDL 2146          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A6P3WX18_DINQU (E3 ubiquitin-protein ligase n=2 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3WX18_DINQU)

HSP 1 Score: 95.1 bits (235), Expect = 1.880e-19
Identity = 61/161 (37.89%), Postives = 90/161 (55.90%), Query Frame = 0
Query:    9 TSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNL 169
            TS++ T  + + + D LA+AAG LP W + L    PFLLP + R  YF   AFG +RS+ +LQ +    ++     G   R     ++R + +  HE    PR     +LL  AEQV+ ++   K++LE  F GE+G G G T  F++ VAAELQRR ++L
Sbjct: 2002 TSKKITNKIVQQIQDPLALAAGALPNWCEELARSCPFLLPFETRRLYFSCTAFGASRSIVWLQTQRDAILERQRAPGLSPRRDDSHEFR-VGRLKHERVSVPRG---DKLLDWAEQVLKVHASRKSILEVAFVGEEGTGLGPTLEFFALVAAELQRRDLDL 2158          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A7R9JSK4_TIMGE (E3 ubiquitin-protein ligase n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9JSK4_TIMGE)

HSP 1 Score: 88.6 bits (218), Expect = 3.560e-17
Identity = 58/161 (36.02%), Postives = 88/161 (54.66%), Query Frame = 0
Query:    9 TSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSVNL 169
            TS++ T  + + + D L +++G LP W + L    PFL P + R   F   AFG +RS+ +LQ +  V ++     G   R     ++R + +  HE  K PR  +   LL  A QVM ++   K++LE  F GE+G G G T  FY+ VAAELQR+ +N+
Sbjct: 2121 TSKKITNKLLQQIQDPLVLSSGALPSWCEELNHSCPFLFPFETRQLCFNCTAFGASRSIVWLQTQRDVTLERQRAPGLSPRREDPHEFR-VGRLKHERVKVPRGEN---LLDWALQVMRIHADRKSILEVEFQGEEGTGLGPTLEFYALVAAELQRKDLNM 2277          
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Match: A0A158P7N2_ANGCA (E3 ubiquitin-protein ligase n=2 Tax=Strongylida TaxID=6308 RepID=A0A158P7N2_ANGCA)

HSP 1 Score: 86.7 bits (213), Expect = 1.650e-16
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 0
Query:   10 SRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYR--------RINQTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGVTASFYSAVAAELQRRSV 167
            S + T  + + LSD L VAA  +P W + L+ G+P L   + +  Y ++ AFGV+R++ +LQ      +D      G  +G+T    R        R+ +  HE  K  R  S   LL+ A +VM  +   KAVLE  + GE+G G G T  FY+ VAAELQR+++
Sbjct: 1708 SDKLTLKLTQELSDALVVAARAMPDWCERLIYGYPCLFSAETKNMYMQATAFGVSRTIVWLQSRRDAALDRAR---GAAQGTTSSAARPHDRYQEYRVGRLKHERIKVTR--SEEHLLEQAVRVMRFHADRKAVLEIEYVGEEGTGLGPTLEFYALVAAELQRKAL 1868          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105362.444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW24_9PHAE1.250e-5263.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CNJ7_9STRA8.420e-2749.67HECT domain-containing protein n=1 Tax=Tribonema m... [more]
D8LBS8_ECTSI5.120e-2496.61HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A151K1J5_9HYME1.010e-1937.89E3 ubiquitin-protein ligase n=1 Tax=Trachymyrmex s... [more]
UPI00084EDDB71.010e-1937.89E3 ubiquitin-protein ligase HECTD1 isoform X2 n=1 ... [more]
UPI00084F35E11.010e-1937.89E3 ubiquitin-protein ligase HECTD1 isoform X1 n=1 ... [more]
A0A6P3WWV4_DINQU1.880e-1937.89E3 ubiquitin-protein ligase n=1 Tax=Dinoponera qua... [more]
A0A6P3WX18_DINQU1.880e-1937.89E3 ubiquitin-protein ligase n=2 Tax=Dinoponera qua... [more]
A0A7R9JSK4_TIMGE3.560e-1736.02E3 ubiquitin-protein ligase n=1 Tax=Timema genevie... [more]
A0A158P7N2_ANGCA1.650e-1635.54E3 ubiquitin-protein ligase n=2 Tax=Strongylida Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45670FAMILY NOT NAMEDcoord: 10..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..176
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 111..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105362contigH-elongata_contig105362:889..1851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105362.444.1mRNA_H-elongata_contig105362.444.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105362 889..1851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105362.444.1 ID=prot_H-elongata_contig105362.444.1|Name=mRNA_H-elongata_contig105362.444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
FSQQPPRPTSRRCTQSVREALSDILAVAAGFLPPWVDALLSGFPFLLPLD
LRLRYFRSLAFGVTRSVAYLQHESAVGVDGGSVGGGGRRGSTGGQYRRIN
QTSHESRKKPRPVSRSQLLQHAEQVMSMYTPSKAVLEFRFAGEKGLGAGV
TASFYSAVAAELQRRSVNLKVLPRSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035983Hect_E3_ubiquitin_ligase