prot_H-elongata_contig1053.440.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1053.440.1
Unique Nameprot_H-elongata_contig1053.440.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length682
Homology
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: D8LMJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ5_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 3.040e-161
Identity = 265/541 (48.98%), Postives = 317/541 (58.60%), Query Frame = 0
Query:  145 LSLRDRLAARTAGVAKRVEQAFRTISGSGRSKKLETPLWAKDSCLKRCNCDHGVPMDNTALVRLERKCRSVQHDAVGSVTIRIDPLVGDELEFENRPPLESMPPPPNVLRLFLEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFMELESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHAEESSTYQQGGSLASGDSLS---GKGEMDQRIGASWERVGVAVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIR-FLANMWEHSGYITDVTFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVYPITNAV 681
            L L DRLAAR A +AK    A + ++G GR +  ETP WA+ +C +RCNC+HGVP D+TA V L+   R ++H+AVG VT+R +PL G ELEFENRPPLE  PPPP VLRLFLEYMD+ TVARCA TS EWH+ECY  N+EG P+HPAY G+HFMEL S  DAC+DKIDG+FF QPP G  GQLFT+GQR VTAW+R E+ V    E+S+  +  GS  SG+S      +G+   RI  SW+  GV +RDTAPFT I P        +S       +  H       FLA  W+         F APSVG+CK HGAP HSCYMYSVSDDR LKVWD+A+K CLHTV+P+ISDCGT                                                                                    VWNVPK  FGH +VCTF++HKRA+TAL++T AHLFSASDEGHV             + Q  RIKCIWVHHA  +SPD G G+LFLGLATG VL YPIT+AV
Sbjct:  107 LGLGDRLAARAAAIAKTAGNALQAVTGEGRRR--ETPPWARAACFRRCNCNHGVPTDSTAFVPLQEG-RKLEHEAVGVVTVRTEPLEGAELEFENRPPLERTPPPPYVLRLFLEYMDSRTVARCAHTSKEWHRECYQRNEEGVPMHPAYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSPGQLFTAGQRRVTAWRRQETEVDTEREQSTASEGSGSTKSGESSETSHSEGDAAPRIEVSWQSAGVCLRDTAPFTMILPV-------NSRPRKNPNMAFHSANTSSCFLA--WQ--------AFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKDCLHTVKPKISDCGT------------------------------------------------------------------------------------VWNVPKASFGHTKVCTFREHKRAITALSLTKAHLFSASDEGHV-------------VRQDRRIKCIWVHHAPPDSPDPGNGSLFLGLATGLVLAYPITDAV 530          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A6U4D539_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D539_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.840e-57
Identity = 147/510 (28.82%), Postives = 239/510 (46.86%), Query Frame = 0
Query:  178 LETPLWAKDSCLKRCNCDHGVPMDNTAL---VRLERKCRSVQHDAVGSVTIRIDPLVGDELEFENRPPLESMPPPPNVLRLFLEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFMELESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHAEESSTYQQGGSLASGDSLSGKGEMDQRIGASWERVGVAVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVG-----YCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRW-FCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVP-KDRFGHKEVCTFQQHKR--AVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVY 675
             +TP WA+ + LKRCNC  GV   ++ +   + L R   S++      + +R++     + EF    P + M P   VL    +Y+ A  +A+ A     W +                   HF++++ L +  E ++     +     + G+L+T+G + V  W  LE                                     ++E +  AVR+TA    I      ++ C+SNGSIR+W L H  KNI ++A  WEH  +I D   + P        +C+         ++YSVSDDR++KVWD   K CL +++P    CGT++SVA S  HLY G+SNG I V+ L R C R +RH C + +     FC Q   +H K  +  + CGG   + K+L++A  +GT +VW++P K  + H+ +     H    A++    T AHLF+A  +  +R+W+L T+ELQ+V+  +   KC++       S       L+ G   G V+++
Sbjct:   95 FKTPKWAEKNELKRCNCLDGVDNGDSRVYYPLNLPRFVTSLE--CPEGIRVRME-----DPEFGWAEPQKVMNPAAEVLDFVFQYVGAKELAKVATVDRLWRERIDMQT-------------HFIDMKQLANDYEHQVHSGRVESCLEFN-GRLYTAGDKRVKVWN-LE-------------------------------------TYECLAEAVRETAVINDIQVVNGALLVCASNGSIRQWSLTHNPKNIAYVAAYWEHRSWINDFIPSEPEPDDDGEMFCR---------FLYSVSDDRTVKVWDANKKVCLFSMDPPNRTCGTMRSVARSARHLYVGSSNGVIYVYPLKRECDREDRHGCSISEHGALPFCLQTELQHGKGIILQLECGGYRRQVKHLYSASTDGTFRVWSLPGKSGYEHECLRVIDAHAPGGALSCFCTTWAHLFTAGQDKVIRVWNLHTMELQKVLHPEELCKCMYAAENEVCS------YLYTGHVDGKVIMW 530          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A7S4A686_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A686_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.400e-31
Identity = 95/300 (31.67%), Postives = 145/300 (48.33%), Query Frame = 0
Query:  388 AVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAA--PSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFAL-GRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLE-----LQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVYPITN 679
            ++RDT+    +  T   +  CS NG+IREW L H+V+NI F A MWEH+  + D+T+    P  G   T      SC     SDDRS++VWD  +      + P      T++SV +S  HLY G S+G + V+++ G       R + ++  E  +  E E  K   + V  M           LF    +GT+ VW +PK+   +  +   + H R +  + +T AH  + SD+G +R + L   +     L+RV+    R+KCI   H +   P    G +  GLA G VLVY + N
Sbjct:  519 SIRDTSAIPTLFITGHSLWTCSRNGAIREWSLPHDVRNIEFRAQMWEHNAEVNDLTWTRNNPMFGGSATEHPRLVSC-----SDDRSVRVWDPDTHCSTAVLNPFSHRSATMRSVYVSQEHLYVGGSDGTVYVYSVDGSTRSLRNREKKRVGLELIYPLETE-LKSGDDVVGAMAIAHERTDMSRLFVTSWSGTVYVWKIPKEDLDYVLIHEIRHHTRRINDVLITRAHFLTCSDDGTIRYYGLCHGDQYEKALERVVDCGSRVKCI---HVTPGDP----GVVVAGLADGRVLVYELGN 805          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: F0YAL2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL2_AURAN)

HSP 1 Score: 134 bits (336), Expect = 2.380e-29
Identity = 88/296 (29.73%), Postives = 145/296 (48.99%), Query Frame = 0
Query:  388 AVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDV--TFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFAL-GRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLFSASDEGHVRIWSLG-----TLELQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVY 675
            A+RDT    K+      +   S NG+IREW L H + NI F   MWEH+  I D+  T A P+ G     G      Y+ + SDDR+++VW+     C   + P    C T++++ +S  HLY G+S+G + V+A+ G       R + ++  E  +  E E   + +E V  +       +   L+ A  +G ++VW VP+D   ++ V T + H + +T + V++ H  + SD+  +R + L         L+R +    R+KC+    A+   P    G +  GLA G VLV+
Sbjct:  278 AIRDTTVIPKLFTACGSLWSGSHNGAIREWSLPHNLTNIEFRVQMWEHNAVINDIVSTDANPNFG-----GMTQEMPYICTCSDDRTVRVWNPVQHNCDAVIRPFNHHCATMRTLFVSKDHLYVGSSDGVVYVYAVDGSTRSLANRQKKRVGVEATYPLEVE-LSNGEEVVSAIKMSKERTKDARLYVASWDGKLRVWTVPRDDLEYELVFTLEHHGQRITEVLVSHRHFITCSDDETIRYYGLCHGDAYDTALERKVECGSRVKCL---SATPGDP----GVMLAGLADGRVLVF 560          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A7S2H458_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H458_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.220e-22
Identity = 79/310 (25.48%), Postives = 133/310 (42.90%), Query Frame = 0
Query:  257 LEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFMELESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHAEESSTYQQGGSLASGDSLSGKGEMDQRIGASWERVGV--AVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVGYCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRV-CLRPERHRCQLHDEPRWFCEQESFKHDK-EPVQHMVCGG 562
            + Y++  ++ R +  S  +  E          + P Y  +    +E  F A E ++ G+   +      G+ +T G + V  WK      +A +EE                             ++RV +   V D  P T        ++  SSNG++R W + H +K +   A MWEH+  + D +           H        +++ SDDR++K WD+   +C HT+EP      T++SVA+SD  L+ G S G I V+      CLR +RH C +   PR +C Q++ +  + + V  +V GG
Sbjct:    1 MPYLNPRSLGRASSVSVVFWSEA--------AVQPHYDDMKRFGVEMKFTAHEKRVKGVVSYR------GRCYTGGDKCVKVWKLQR--ASAESEE-----------------------------FDRVELIHTVHDLCPVTFCQEIDGNLLVGSSNGAVRMWTMPHSIKKMNQRAVMWEHNALVHDAS-----------HWQRGKFSTLFTASDDRTIKAWDLHQVRCEHTLEPLDRRGATMRSVAVSDSFLFVGHSRGVIYVYLTDTSSCLREDRHECYI--SPRPYCLQKTLQDTEGQIVSSIVVGG 252          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A175YCM8_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YCM8_DAUCS)

HSP 1 Score: 67.8 bits (164), Expect = 2.760e-8
Identity = 63/213 (29.58%), Postives = 94/213 (44.13%), Query Frame = 0
Query:  464 MYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDF-HLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVC-TFQQHKRAVTALAVTNAHLFSASDEGHVRIWS--------LGTLELQRVIGQKWRIKCIWV--HHASTESPDAGEGNLF 664
            +YSVS DR+LK+W  +  KCL +V     D   + +VA+SD  H+YTG++   I V+              + H E + F      KH K  V  +     G     L     + +I VW   KD +G+ EV    + H ++V  L VTN  L S S +  VR+W         L  LE     G    +KC+ +   H+S  S +    +L+
Sbjct:  205 IYSVSWDRTLKIWRASDFKCLESVRDAHDDA--INAVALSDDGHVYTGSAXXXIXVWK-------------KQHGEKKHFLVATLEKH-KSGVNTLALSSDGS---VLXXXXXDRSIVVWE--KDEYGNMEVAGVLKGHTKSVLCLGVTNDILCSGSADATVRVWKDVDRIYSCLAVLE-----GHGSPVKCLTLASDHSSNHSGNTSSYHLY 391          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A835Z1Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.720e-8
Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 0
Query:  576 NGTIKVWNVPKDRFGHKEVCT-----FQQHKRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHHASTESP-----------DAGEGNLFLGLATGSV 672
            +G++ VW  P+ RFGH+               A+T +AV NAH+ SA D G VRI+S GTL LQRV+    R+K + +   +  +            D G G L+LGL+ G+V
Sbjct:    3 DGSLWVWAAPRRRFGHRGRALRSGGXXXXXGAAITHIAVGNAHVLSADDAGEVRIYSAGTLRLQRVLRAGARVKSVCLRQPAAAATAXXXXXXXRGGDDG-GRLYLGLSDGTV 114          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: UPI00090149A3 (uncharacterized protein LOC104761001 n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00090149A3)

HSP 1 Score: 60.5 bits (145), Expect = 6.880e-6
Identity = 58/219 (26.48%), Postives = 95/219 (43.38%), Query Frame = 0
Query:  464 MYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDF-HLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQ-HKRAVTALAVTNAHLFSASDEGHVRIWSLGTLE---LQRVIGQKWRIKCIWVHHASTESPDAGEGNLFLGLATGSVLVYPI 677
            +YSVS DR+LK+W     KCL +      D   + +VA+S+   +YTG+S+ RI V+    V    E+ + + H       E  S       +  +   G  G    L +   +G+I VW   +D  G+  V   ++ H  AV  L V +  L S S +  VR+W     +   L  + G +  +KC+      +  P     +++ G     V V+ I
Sbjct:  183 LYSVSWDRTLKIWRTTDFKCLESFTNAHDDA--INAVALSENGDIYTGSSDQRIKVWRKN-VYEENEKKKKKKHSLVATLLEHNSG------INALALSGNNG--SLLHSGGSDGSILVWE--RDEGGNNGVAGMRRGHTEAVLCLTVVSDILCSGSADKTVRLWKCSATDYSCLAVLEGHRGPVKCLTGAIRDSSKPSETSYHIYSGGLDSQVKVWQI 388          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: A0A4D9BSS9_SALSN (Uncharacterized protein n=2 Tax=Salvia TaxID=21880 RepID=A0A4D9BSS9_SALSN)

HSP 1 Score: 57.8 bits (138), Expect = 3.610e-5
Identity = 56/194 (28.87%), Postives = 81/194 (41.75%), Query Frame = 0
Query:  464 MYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKHDKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAHLF-SASDEGHVRIW-SLGTLE---LQRVIGQKWRIKCIWVHHAS 652
            +YSVS DR+LKVW     KCL +V     D   + +VA++D  +YTG+S+GRI V+              +   E  +  +    KH K  V  +   G G                  N         E+   + H +AV  LA    H+  S S +  VR+W  +G      L  + G +  IKCI VH +S
Sbjct:  167 LYSVSWDRTLKVWRTGDFKCLQSVPNAHDDA--INAVAVNDGAVYTGSSDGRIKVWR-------------RKQGEKSYSLDATLAKH-KAGVNALAMSGDGAVLXXXXXXXXXXXXXSEN-------GGEMAVLRGHAKAVLCLAAVADHVICSGSADQTVRVWRGVGKASYACLAILEGHRGPIKCITVHASS 337          
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Match: B9RAQ6_RICCO (F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RAQ6_RICCO)

HSP 1 Score: 57.4 bits (137), Expect = 4.520e-5
Identity = 65/285 (22.81%), Postives = 123/285 (43.16%), Query Frame = 0
Query:  387 VAVRDTAPFTKIHPTIKLIICCSSNGSIREWLLAHEVKNIRF-LANMWEHSGYITDVTFAAPS-VGYCKT-HGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSVAISDFH-LYTGTSNGRIVVFA-LGR-----VCLRPERHRCQLHD----------------------EPRWFCEQESFKHDKEPVQHMVCGGPGG-----RYKYLFTAVRNG-TIKVWNVPKDRFGHKEVCTFQQHKRAVTALAVTNAH-----LFSASDEGHVRIWSL 628
            +A  +T  FT  H   K+ +   S+ S +E  L H +  ++  L N      Y+          + +  T  G   H   MYSVS D+SLK+WD+ + +CL +V   ++    + +VAISD   +YTG+++G I V+  +GR     +    E+H+  ++                       E +   ++   +H++      +CG  G         YL  +  +  T++VW     + G+  +   + H+R V +L   + +     + S S +G +++W +
Sbjct:   67 IAFHNTKVFTA-HQDCKIRVWQVSHSSSKELHLVHTLPTVKDRLCNFLLPQNYVNVRRHKKRLWIEHWDTVSGLAMHGGLMYSVSWDKSLKIWDVNNNRCLESV---LAHQDAVNTVAISDKGTVYTGSADGLIRVWKKVGRQRKHSLVTTLEKHKSTVNALALNGDGSVLFSGGCDRSIMVWERKEDVDEHGNEHNQMVFVEALCGHAGAILCLMNVGYLIVSGSSDQTVRVWQQYGKKNGYCCMVVLEGHERPVKSLVAASNNGLSLSICSGSLDGEIKVWEI 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1053.440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LMJ5_ECTSI3.040e-16148.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U4D539_9STRA1.840e-5728.82Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4A686_9STRA3.400e-3131.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YAL2_AURAN2.380e-2929.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2H458_9STRA1.220e-2225.48Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A175YCM8_DAUCS2.760e-829.58Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
A0A835Z1Z8_9STRA4.720e-836.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00090149A36.880e-626.48uncharacterized protein LOC104761001 n=3 Tax=Camel... [more]
A0A4D9BSS9_SALSN3.610e-528.87Uncharacterized protein n=2 Tax=Salvia TaxID=21880... [more]
B9RAQ6_RICCO4.520e-522.81F-box and wd40 domain protein, putative n=1 Tax=Ri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 590..627
e-value: 6.1E-4
score: 29.1
coord: 425..477
e-value: 0.84
score: 17.5
coord: 480..520
e-value: 31.0
score: 7.6
coord: 540..583
e-value: 18.0
score: 9.0
coord: 381..418
e-value: 380.0
score: 0.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 594..627
e-value: 0.066
score: 14.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 597..636
score: 9.74
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 463..486
score: 8.938
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 564..680
e-value: 1.8E-12
score: 49.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 300..563
e-value: 2.3E-15
score: 58.3
IPR001810F-box domainPFAMPF00646F-boxcoord: 249..277
e-value: 9.2E-4
score: 19.0
NoneNo IPR availablePANTHERPTHR44489FAMILY NOT NAMEDcoord: 38..645
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 8..27
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 4..33
score: 8.016
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 464..478
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 570..584
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 569..636
score: 11.392
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 399..677

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1053contigH-elongata_contig1053:7159..15954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1053.440.1mRNA_H-elongata_contig1053.440.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1053 7159..15954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1053.440.1 ID=prot_H-elongata_contig1053.440.1|Name=mRNA_H-elongata_contig1053.440.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=682bp
MTLASSHWRCKHCKRDNANDEEFCDNCLAPRKASDTPRETCRTCLHRHSV
EKPCHVYVINETSWKRKVQKWSKSRRSDEGSLSSGSSASETLSALEQITY
HDSDEDIDSDDQREGEKVEDEESERSKASSVDTEETDKSEKISPLSLRDR
LAARTAGVAKRVEQAFRTISGSGRSKKLETPLWAKDSCLKRCNCDHGVPM
DNTALVRLERKCRSVQHDAVGSVTIRIDPLVGDELEFENRPPLESMPPPP
NVLRLFLEYMDASTVARCARTSTEWHQECYALNKEGKPIHPAYAGLHFME
LESLFDACEDKIDGLFFQQPPRGDSGQLFTSGQRSVTAWKRLESPVAAHA
EESSTYQQGGSLASGDSLSGKGEMDQRIGASWERVGVAVRDTAPFTKIHP
TIKLIICCSSNGSIREWLLAHEVKNIRFLANMWEHSGYITDVTFAAPSVG
YCKTHGAPAHSCYMYSVSDDRSLKVWDMASKKCLHTVEPQISDCGTLQSV
AISDFHLYTGTSNGRIVVFALGRVCLRPERHRCQLHDEPRWFCEQESFKH
DKEPVQHMVCGGPGGRYKYLFTAVRNGTIKVWNVPKDRFGHKEVCTFQQH
KRAVTALAVTNAHLFSASDEGHVRIWSLGTLELQRVIGQKWRIKCIWVHH
ASTESPDAGEGNLFLGLATGSVLVYPITNAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001810F-box_dom
IPR001876Znf_RanBP2
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf