prot_H-elongata_contig105121.426.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig105121.426.1
Unique Nameprot_H-elongata_contig105121.426.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
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BLAST of mRNA_H-elongata_contig105121.426.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.040e-24
Identity = 58/104 (55.77%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:    1 ALRNKRLESAIFRPTLERHCPPPGASATTKSRTGVFG--PILPSDTAVAVGRQLLSRSISYADFDDLPDPRVFQLHGDLKGWASSPSRLDFLCKELVRQRNAAV 102
            A+RN+RL+ A  RP  + H    G+     S T      P    D+  A+GRQLLSR I+YA+FD LPDP  FQLH DLKGW  SPSRLDFL KELVRQRNAA+
Sbjct: 1155 AMRNERLKHATLRPLRDNHFLQGGSRLGAASVTEPVSVPPSAALDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAI 1258
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BLAST of mRNA_H-elongata_contig105121.426.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 5.180e-24
Identity = 58/104 (55.77%), Postives = 68/104 (65.38%), Query Frame = 0 
Query:    1 ALRNKRLESAIFRPTLERHCPPPGASATTKSRTGVFG--PILPSDTAVAVGRQLLSRSISYADFDDLPDPRVFQLHGDLKGWASSPSRLDFLCKELVRQRNAAV 102
            A+RN+RL+ A  RP  + H    G+     S T      P    D+  A+GRQLLSR I+YA+FD LPDP  FQLH DLKGW  SPSRLDFL KELVRQRNAA+
Sbjct: 1129 AMRNERLKHATLRPLPDNHFLQGGSRLGAASVTEPVSLPPSACLDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAI 1232
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig105121.426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI2.040e-2455.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE5.180e-2455.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig105121contigH-elongata_contig105121:1730..2035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig105121.426.1mRNA_H-elongata_contig105121.426.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig105121 1730..2035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig105121.426.1 ID=prot_H-elongata_contig105121.426.1|Name=mRNA_H-elongata_contig105121.426.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
ALRNKRLESAIFRPTLERHCPPPGASATTKSRTGVFGPILPSDTAVAVGR
QLLSRSISYADFDDLPDPRVFQLHGDLKGWASSPSRLDFLCKELVRQRNA
AV
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