prot_H-elongata_contig10441.363.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 100 bits (248), Expect = 4.540e-22 Identity = 46/107 (42.99%), Postives = 72/107 (67.29%), Query Frame = 0
Query: 9 VYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESG 115
V+++V RP+ + + G+K ++K K G DG+VEKYK RLVAQGF QVEG+ Y + +P + SIR++LA AA D E+ D + AFL +++ E+Y+++P + S
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASA 1132
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 99.8 bits (247), Expect = 6.200e-22 Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 0
Query: 9 VYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESGG 116
+Y +V +P+ + V G K ++K K G DG +EKYK RLVA+GF QVEG+ YTD +P ASIR VLA AA+ D ++ D + AFL D+D E+Y+ P + G
Sbjct: 1020 LYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFDHDAG 1127
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI) HSP 1 Score: 98.6 bits (244), Expect = 1.570e-21 Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 1 MCDMAENCVYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWES 114
+ A+ +Y +V RP+ + V K +++ K G DGK++KYK RLVA+GF QVEGV YTD +P ASIRM+LA AA D E+ D + AFL D++ E+++E P + +
Sbjct: 987 LLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQD 1100
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 96.3 bits (238), Expect = 1.020e-20 Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 9 VYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESGGV--KIN 120
+Y +V RP+ + V K ++K K G DG++EKYK RLVA+GF QVEG+ + + +P AS+R +LA AA D E+ D + AFL D+D E+Y+++P + S + K+N
Sbjct: 957 LYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLN 1070
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A401H317_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H317_9APHY) HSP 1 Score: 95.5 bits (236), Expect = 1.860e-20 Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 9 VYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESGGV--KIN 120
+Y +V RP+ + V K ++K K G DG++EKYK RLVA+GF QVEG+ + + +P AS+R +LA AA D E+ D + AFL D+D E+Y+++P + S + K+N
Sbjct: 898 LYDEVERPQNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFRRSNSLVWKLN 1011
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 95.5 bits (236), Expect = 1.860e-20 Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 9 VYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESGGV--KIN 120
+Y +V RP+ + V K ++K K G DG++EKYK RLVA+GF QVEG+ + + +P AS+R +LA AA D E+ D + AFL D+D E+Y+++P + S + K+N
Sbjct: 634 LYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLN 747
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A392MQF0_9FABA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MQF0_9FABA) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-20 Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 0
Query: 4 MAENCVYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPE 109
+A+NC +K V P + G + +YK K DG VE+YK RLVA+G+ QVEG+ Y + SP ++R +LA AA+K+ L D AFL D+ ++Y++IPE
Sbjct: 32 LAKNCTWKMVELPPHTKPIGCRWVYKIKHKSDGTVERYKARLVAKGYNQVEGIDYFETFSPVAKLITVRTLLAIAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPE 137
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 94.7 bits (234), Expect = 3.210e-20 Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0
Query: 7 NCVYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESGGVKI 119
N +K V P K G K +YK K DG +E+YK RLVAQGF Q+EG+ Y + SP S+R LA A K EL D AFL D++ E+Y+++PE + +G K+
Sbjct: 110 NQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKV 222
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A5K0WT86_9MAGN (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WT86_9MAGN) HSP 1 Score: 94.7 bits (234), Expect = 3.300e-20 Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 0
Query: 3 DMAENCVYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIPEKYWESG 115
MA+N + VS P+ G K +YK K G +E+YK RLVA+GF Q+EG+ Y + +SP A S+R+VLA A D EL D + AFL D+D E+Y++ P+ + ESG
Sbjct: 155 SMAKNQTWSLVSLPEGVKPVGCKWVYKTKRDSKGNIERYKARLVAKGFTQMEGIDYNEIYSPVSAKESMRIVLALVAHFDLELHQMDVKTAFLNGDLDEEVYMDQPQGFSESG 267
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY) HSP 1 Score: 94.7 bits (234), Expect = 3.500e-20 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query: 9 VYKQVSRPKYKLVFGTKMLYKRKAGQDGKVEKYKCRLVAQGFWQVEGVHYTDRHSPTPATASIRMVLATAAVKDGELRHFDAEQAFLKADIDVELYIEIP 108
+Y +V RP+ + V G K ++K K G DG++EKYK RLVA+GF QVE V Y + +PT ++IR +LA AA D E+ D + AFL D+D E+Y+ P
Sbjct: 980 LYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMACP 1079 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10441.363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig10441.363.1 ID=prot_H-elongata_contig10441.363.1|Name=mRNA_H-elongata_contig10441.363.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bpback to top |