prot_H-elongata_contig104195.349.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig104195.349.1
Unique Nameprot_H-elongata_contig104195.349.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A6H5KP08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP08_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 8.790e-31
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 RTPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKT 69
            RTPLHLACWAG+  MI LLL HR+DCM  AQDGFTPLHFC+QAGCAEGCRLLL AGAK DAKL K +KT
Sbjct:   41 RTPLHLACWAGKAGMIDLLLKHRADCMAEAQDGFTPLHFCSQAGCAEGCRLLLGAGAKVDAKLRKTKKT 109          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: D8LFR3_ECTSI (Ion channel nompc, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR3_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 5.190e-13
Identity = 34/43 (79.07%), Postives = 36/43 (83.72%), Query Frame = 0
Query:   27 MLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKT 69
            M  AQDGFTPLHFC+QAGCA GCRLLL AGAK DAKL K +KT
Sbjct:    1 MAEAQDGFTPLHFCSQAGCAAGCRLLLGAGAKVDAKLRKTKKT 43          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A812RIV7_9DINO (Ripk4 protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812RIV7_9DINO)

HSP 1 Score: 65.9 bits (159), Expect = 8.910e-11
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 RTPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLL-EAGAKAD---------AKLNKNRKTALHLAAAKGHAE 81
            RTPLH+A + G++  +A LL   +   L A DGF PLHF AQAG  E  RLL+ + G+K +           ++K +K+ALHLA  KGHAE
Sbjct:   31 RTPLHMAAFFGKSEAVAKLLEKGASPTLEAMDGFLPLHFAAQAGHLEVLRLLIRKVGSKGEFGEVKKHVNRVVHKGKKSALHLALLKGHAE 121          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A7S0ZMK3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZMK3_NOCSC)

HSP 1 Score: 65.5 bits (158), Expect = 1.330e-10
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 RTPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKAD--------AKLNKNRKTALHLAAAKGHAE 81
            RTPLHLAC+ G+T+    LLN R+D  L A DG    HF AQ G  E  +LL+ A ++           +  K +K+ALH+A AKGHAE
Sbjct:   46 RTPLHLACYFGKTSTAESLLNARADFGLEANDGCLASHFAAQQGHKEVLQLLVRAASQGGPGSVVEFLGRAMKGKKSALHVAVAKGHAE 134          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A225WRI9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WRI9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.480e-9
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    1 RTPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKTALHLAAAKGHAE 81
            R PLH A  A   + +  LL H +D +     G+TP+H  A +G  +    L++AGA    +L K R+TALH+AA++GH +
Sbjct:   93 RRPLHFAVLASSASTVRELLAHHADVLAEDYRGWTPIHGAAYSGDVDSVTALVDAGASVTTQLTKQRETALHVAASRGHVD 173          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: W6UPW2_ECHGR (Transient receptor potential cation channel subfamily A member n=1 Tax=Echinococcus granulosus TaxID=6210 RepID=W6UPW2_ECHGR)

HSP 1 Score: 57.0 bits (136), Expect = 1.330e-7
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    2 TPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKTALHLAAAKGH 79
            TPLH+A    QT +++LL+   S  +   Q G TPLH+ AQAGC E C+++L A        +    TALH AA KGH
Sbjct:  566 TPLHIAAAHAQTQVVSLLIAKGSS-LRRCQKGRTPLHWAAQAGCLETCKVILGANTCIIDACDFRGMTALHYAAQKGH 642          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A087W1L7_ECHMU (Transient receptor potential cation channel n=2 Tax=Echinococcus TaxID=6209 RepID=A0A087W1L7_ECHMU)

HSP 1 Score: 57.0 bits (136), Expect = 1.330e-7
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    2 TPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKTALHLAAAKGH 79
            TPLH+A    QT +++LL+   S  +   Q G TPLH+ AQAGC E C+++L A        +    TALH AA KGH
Sbjct:  318 TPLHIAAAHAQTQVVSLLIAKGSS-LRRCQKGRTPLHWAAQAGCLETCKVILGANTCIIDACDFRGMTALHYAAQKGH 394          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A7S0FY29_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FY29_9DINO)

HSP 1 Score: 54.3 bits (129), Expect = 1.110e-6
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 0
Query:    2 TPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGA 57
            TPL  A   G+   +ALLL+  +     A+DG TPLHF A AGC E C+ LL AGA
Sbjct:  223 TPLMRAAKEGRAKAVALLLDSGATPHAQAEDGMTPLHFAAAAGCRESCQALLRAGA 278          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: A0A0R3WRT3_HYDTA (ANK_REP_REGION domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WRT3_HYDTA)

HSP 1 Score: 50.8 bits (120), Expect = 1.120e-5
Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = 0
Query:    1 RTPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKTALHLAAAKGH 79
            RTPLH+A    QT++++LL+   S      Q G TPLH+ AQAG  E C+++L A        +    TALH AA K H
Sbjct:   79 RTPLHIAAAYAQTHVVSLLIAKGSSSR-RCQKGRTPLHWAAQAGSLETCKVILGANICIIDARDFRGMTALHYAAQKDH 156          
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Match: UPI001E275A59 (transient receptor potential channel pyrexia-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E275A59)

HSP 1 Score: 51.2 bits (121), Expect = 1.450e-5
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
Query:    2 TPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCRLLLEAGAKADAKLNKNRKTALHLAAAKGHAE 81
            T L LA W  + N +  LL    +  +    G + +H  A  G A+G +LL+ +GAKAD+  NK + T LH AA+KG  E
Sbjct:   93 TALLLAIWLERNNTVEKLLQKHKNTEIKDPSGRSAMHLAAFIGNADGLKLLIHSGAKADSWDNKYKITPLHCAASKGRLE 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig104195.349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KP08_9PHAE8.790e-3179.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFR3_ECTSI5.190e-1379.07Ion channel nompc, putative n=1 Tax=Ectocarpus sil... [more]
A0A812RIV7_9DINO8.910e-1145.05Ripk4 protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
A0A7S0ZMK3_NOCSC1.330e-1044.94Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A225WRI9_9STRA3.480e-938.27Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
W6UPW2_ECHGR1.330e-743.59Transient receptor potential cation channel subfam... [more]
A0A087W1L7_ECHMU1.330e-743.59Transient receptor potential cation channel n=2 Ta... [more]
A0A7S0FY29_9DINO1.110e-650.00Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A0R3WRT3_HYDTA1.120e-541.77ANK_REP_REGION domain-containing protein n=1 Tax=H... [more]
UPI001E275A591.450e-538.75transient receptor potential channel pyrexia-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..28
e-value: 2.9
score: 16.9
coord: 32..61
e-value: 0.0085
score: 25.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 11.033
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..25
score: 9.591
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..61
e-value: 8.7E-13
score: 48.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..81
score: 24.878
NoneNo IPR availableGENE3D1.25.40.960coord: 1..34
e-value: 1.1E-7
score: 33.8
coord: 35..81
e-value: 7.5E-13
score: 50.4
NoneNo IPR availablePANTHERPTHR24178:SF9ANKYRIN REPEAT AND SOCS BOX PROTEIN 3coord: 1..81
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 1..81
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig104195contigH-elongata_contig104195:474..2226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig104195.349.1mRNA_H-elongata_contig104195.349.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig104195 474..2226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig104195.349.1 ID=prot_H-elongata_contig104195.349.1|Name=mRNA_H-elongata_contig104195.349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
RTPLHLACWAGQTNMIALLLNHRSDCMLTAQDGFTPLHFCAQAGCAEGCR
LLLEAGAKADAKLNKNRKTALHLAAAKGHAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf