prot_H-elongata_contig103894.329.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103894.329.1
Unique Nameprot_H-elongata_contig103894.329.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: UPI00177F438C (secreted RxLR effector protein 161-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00177F438C)

HSP 1 Score: 57.8 bits (138), Expect = 1.310e-8
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    2 TKFPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            T +PYREAVG+LM+ AT TR DI  AV  V+R+ EKP  AH NAV +++
Sbjct:   98 TAYPYREAVGSLMYLATGTRPDISYAVGVVSRYLEKPTSAHVNAVKRIL 146          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A6H5JKT7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKT7_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.480e-8
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    5 PYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            P+RE VG+LMW A  TRLDI NAVRAVAR   +P  +H+ A  K++
Sbjct:  370 PFREVVGSLMWIANQTRLDISNAVRAVARHSHEPKTSHRKAAQKIL 415          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: Q45W66_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W66_PHACR)

HSP 1 Score: 55.1 bits (131), Expect = 1.830e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    4 FPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            FPYREAVG+LM+ A  TR DI  AV+ +++FCE+P  AH  A+ +++
Sbjct: 1161 FPYREAVGSLMYAAVGTRPDISYAVQTLSQFCERPSTAHWTALKRVL 1207          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.370e-7
Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    3 KFPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            ++P+R  +G+L+W A +TR DI NAVRAVAR+C +P   H  A + ++
Sbjct:  160 EYPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGIL 207          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.410e-7
Identity = 22/48 (45.83%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    3 KFPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            ++P+R  +G+L+W A +TR DI NAVRAVAR+C +P   H  A + ++
Sbjct:  464 EYPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGIL 511          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: UPI001E1BC78C (secreted RxLR effector protein 161-like n=2 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BC78C)

HSP 1 Score: 53.5 bits (127), Expect = 5.180e-7
Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    4 FPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKM 49
            +PYREAVGAL++ A +TR DI  AV  V+++C+ P P+H +AV+++
Sbjct:   35 YPYREAVGALLYVALMTRPDICYAVGQVSKYCQNPDPSHWDAVVQI 80          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A1Y1KZM0_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1KZM0_PHOPY)

HSP 1 Score: 53.1 bits (126), Expect = 8.750e-7
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    2 TKFPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            T FPYREAVG+LM+    TR DI  AV   +R  EKP  AH NAV +++
Sbjct:  931 TNFPYREAVGSLMYLGVATRPDISFAVGNASRHLEKPAVAHVNAVKRIL 979          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A0P6GQB1_9CRUS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6GQB1_9CRUS)

HSP 1 Score: 53.1 bits (126), Expect = 8.750e-7
Identity = 23/46 (50.00%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    4 FPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKM 49
            +PYREAVGAL++ A +TR DI  AV  V+++C+ P  +H NAV ++
Sbjct: 1260 YPYREAVGALLYLALMTRPDISYAVGQVSKYCQNPNESHWNAVTQI 1305          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A6H5KKT4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT4_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.240e-6
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    3 KFPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            ++P+R  VG+L+W A +TR DI N+VRAVAR+C  P   H  A   ++
Sbjct:  682 EYPFRALVGSLLWIALLTRPDIANSVRAVARYCSAPTLIHWKAARSIL 729          
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Match: A0A8J2RPB7_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2RPB7_9CRUS)

HSP 1 Score: 51.2 bits (121), Expect = 4.200e-6
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    4 FPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM 50
            FP+REAVG+LM+ AT TR DI  AV  VA+F   P  AH  AV +++
Sbjct: 1181 FPFREAVGSLMFAATCTRPDIAFAVNQVAQFSTNPAKAHWEAVKRIL 1227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103894.329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00177F438C1.310e-857.14secreted RxLR effector protein 161-like n=1 Tax=Rh... [more]
A0A6H5JKT7_9PHAE1.480e-856.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q45W66_PHACR1.830e-751.06Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A6H5JWK8_9PHAE3.370e-745.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JR13_9PHAE3.410e-745.83Integrase catalytic domain-containing protein n=1 ... [more]
UPI001E1BC78C5.180e-750.00secreted RxLR effector protein 161-like n=2 Tax=Da... [more]
A0A1Y1KZM0_PHOPY8.750e-753.06Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]
A0A0P6GQB1_9CRUS8.750e-750.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KKT4_9PHAE2.240e-645.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J2RPB7_9CRUS4.200e-653.19Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103894contigH-elongata_contig103894:155..307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103894.329.1mRNA_H-elongata_contig103894.329.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103894 2..331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103894.329.1 ID=prot_H-elongata_contig103894.329.1|Name=mRNA_H-elongata_contig103894.329.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MTKFPYREAVGALMWTATITRLDIENAVRAVARFCEKPGPAHKNAVMKMM
*
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