prot_H-elongata_contig103781.319.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103781.319.1
Unique Nameprot_H-elongata_contig103781.319.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.910e-57
Identity = 96/100 (96.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRN 100
            MLDMVQEFL+LRGH+HERLDGRTTGNERQKSIDRFNR+PNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR+
Sbjct: 2355 MLDMVQEFLSLRGHKHERLDGRTTGNERQKSIDRFNRDPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRD 2454          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: A0A836CJJ2_9STRA (SNF2 family N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ2_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.870e-47
Identity = 79/99 (79.80%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR 99
            MLD++ E+ +L G  HERLDGR TGNERQ++IDRFNR+P SF+FLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQAMARCHRIGQTK V +YRLITR
Sbjct:  393 MLDIIGEYASLSGIPHERLDGRITGNERQRAIDRFNRDPASFLFLLSTRAGGVGINLTAADVCIIFDSDWNPQNDVQAMARCHRIGQTKQVAIYRLITR 491          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: A0A7S3UZC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZC9_HETAK)

HSP 1 Score: 165 bits (417), Expect = 1.570e-46
Identity = 80/99 (80.81%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR 99
            +LD+++EF   RG+  ERLDGR TGN RQ+SIDRFNR+P+SFVFLLSTRAGGVGINLTAADT II+DSDWNPQNDVQA ARCHRIGQTK VMVYRLITR
Sbjct:  401 VLDLLEEFCEYRGYPCERLDGRITGNARQESIDRFNRDPDSFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDVQAQARCHRIGQTKDVMVYRLITR 499          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: K0TFF6_THAOC (Helicase C-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFF6_THAOC)

HSP 1 Score: 158 bits (400), Expect = 2.590e-45
Identity = 73/98 (74.49%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLIT 98
            MLD++ ++   R  RHERLDGR  G ERQK+IDRF  E +SF+FLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK VM+YRL+T
Sbjct:   32 MLDLISDYCTFRDFRHERLDGRVRGTERQKAIDRFETEEDSFIFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVMIYRLVT 129          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: A0A812VYK8_SYMMI (Chd6 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VYK8_SYMMI)

HSP 1 Score: 161 bits (407), Expect = 8.810e-45
Identity = 75/99 (75.76%), Postives = 87/99 (87.88%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR 99
            M+D + E+  +RG+  ERLDGR  GN+RQK+IDRFN +P SF+FLLSTRAGGVGINLTAADT II+DSDWNPQNDVQAMARCHRIGQ+K+V VYRLITR
Sbjct:  219 MIDFIDEYCLIRGYNRERLDGRVRGNDRQKAIDRFNMDPASFIFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDVQAMARCHRIGQSKNVTVYRLITR 317          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: A0A7S2DNW9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNW9_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.450e-44
Identity = 73/99 (73.74%), Postives = 87/99 (87.88%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR 99
            MLD+++E+   + +  ERLDG+ TG ERQK++DRFN+  +SFVFLLSTRAGGVGINLTAADTCII+DSDWNPQNDVQAMARCHRIGQ K VM+YRL+TR
Sbjct:  242 MLDLLEEYCLKKLYSVERLDGKVTGKERQKAMDRFNQNADSFVFLLSTRAGGVGINLTAADTCIIFDSDWNPQNDVQAMARCHRIGQKKKVMIYRLVTR 340          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: A0A7S2EV94_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EV94_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.180e-44
Identity = 76/98 (77.55%), Postives = 85/98 (86.73%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLIT 98
            MLD++ ++   RG RHERLDGR  GNERQK+IDRF  E +SF+FLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK VM+YRLIT
Sbjct: 1430 MLDLISDYCDFRGFRHERLDGRVRGNERQKAIDRFETEHDSFLFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVMIYRLIT 1527          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: W7TC43_9STRA (Chromodomain-helicase-dna-binding protein 7 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC43_9STRA)

HSP 1 Score: 161 bits (408), Expect = 5.710e-44
Identity = 78/99 (78.79%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR 99
            +LD+++EF   RG   ERLDGR TGN+RQ++IDRFN +P+SFVFLLSTRAGGVGINLTAADT II+DSDWNPQNDVQAMARCHRIGQTK V VYRLITR
Sbjct: 1596 VLDLLEEFCERRGFPVERLDGRVTGNQRQQAIDRFNTDPDSFVFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDVQAMARCHRIGQTKEVQVYRLITR 1694          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: A0A7R9YC09_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC09_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.660e-43
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITR 99
            MLD++Q+F   RG   ERLDG  TGN+RQK+IDRFN   +SFVFLLSTRAGGVGINLTAADT IIYDSDWNPQNDVQAMARCHRIGQTK V VYRLITR
Sbjct:  635 MLDLLQDFCGHRGFSCERLDGAITGNDRQKAIDRFNTREDSFVFLLSTRAGGVGINLTAADTVIIYDSDWNPQNDVQAMARCHRIGQTKDVRVYRLITR 733          
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Match: B8LC70_THAPS (Chromodomain-helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC70_THAPS)

HSP 1 Score: 157 bits (398), Expect = 5.490e-43
Identity = 74/98 (75.51%), Postives = 84/98 (85.71%), Query Frame = 0
Query:    1 MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRAGGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLIT 98
            MLD++ ++   R  R+ERLDGR  GNERQK+IDRF  E +SFVFLLSTRAGGVGINLTAAD CII+DSDWNPQNDVQA ARCHRIGQTK VM+YRL+T
Sbjct:  450 MLDLISDYCDFREFRYERLDGRVRGNERQKAIDRFETEKDSFVFLLSTRAGGVGINLTAADICIIFDSDWNPQNDVQAQARCHRIGQTKDVMIYRLVT 547          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103781.319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G873_ECTSI1.910e-5796.00Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
A0A836CJJ2_9STRA1.870e-4779.80SNF2 family N-terminal domain-containing protein (... [more]
A0A7S3UZC9_HETAK1.570e-4680.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K0TFF6_THAOC2.590e-4574.49Helicase C-terminal domain-containing protein n=1 ... [more]
A0A812VYK8_SYMMI8.810e-4575.76Chd6 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S2DNW9_9STRA1.450e-4473.74Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S2EV94_9STRA4.180e-4477.55Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
W7TC43_9STRA5.710e-4478.79Chromodomain-helicase-dna-binding protein 7 n=2 Ta... [more]
A0A7R9YC09_9STRA2.660e-4379.80Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
B8LC70_THAPS5.490e-4375.51Chromodomain-helicase (Fragment) n=1 Tax=Thalassio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 3..86
e-value: 1.3E-25
score: 101.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 4..86
e-value: 9.3E-18
score: 64.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..101
score: 14.985
NoneNo IPR availableGENE3D3.40.50.300coord: 1..101
e-value: 1.5E-54
score: 187.1
NoneNo IPR availablePANTHERPTHR45623:SF11KISMET, ISOFORM Ccoord: 1..100
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 1..100
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103781contigH-elongata_contig103781:1092..1848 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103781.319.1mRNA_H-elongata_contig103781.319.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103781 1092..1878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103781.319.1 ID=prot_H-elongata_contig103781.319.1|Name=mRNA_H-elongata_contig103781.319.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MLDMVQEFLALRGHRHERLDGRTTGNERQKSIDRFNREPNSFVFLLSTRA
GGVGINLTAADTCIIYDSDWNPQNDVQAMARCHRIGQTKSVMVYRLITRN
W*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase