prot_H-elongata_contig103738.313.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig103738.313.1
Unique Name	prot_H-elongata_contig103738.313.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	178

Homology

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: D7FRY4_ECTSI (ThiC-associated domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRY4_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 1.280e-104
Identity = 153/181 (84.53%), Postives = 166/181 (91.71%), Query Frame = 0

Query:    1 MVASPPRLD----FPGQIKAGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            MVASPP+++     PG  K G GRVKRT DP+NPDFHEVASFGDAYPESTK Y+E+ HA TGH+M+VPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVR EW+KRRE+SGDEVFTQM+YAKKG+ITEEMAY AAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKV+
Sbjct:   44 MVASPPKVEPVEVAPGFNKPGSGRVKRTTDPYNPDFHEVASFGDAYPESTKRYQEIVHAETGHKMKVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRGEWVKRREDSGDEVFTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVK 224

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A835Z789_9STRA (ThiC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z789_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.560e-80
Identity = 123/177 (69.49%), Postives = 142/177 (80.23%), Query Frame = 0

Query:    1 MVASPPRLDFPGQIKAGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            MV +PP       ++ G GRVK T DP+NP F   A FG AYP STK+Y+EV H  TG  +RVPFRRIHL+DPDPGCSH+DVYDT+GPLG DP+ GLP +R  W+KRREE GDE FTQM+YAK+G+ITEEMAYVAAREGMD EFVRSEV RGRAIIPSN+ H ELEPMIIGR+FKV+
Sbjct:   51 MVMTPPEKI----VEPGSGRVKPTKDPYNPQFRSAADFGVAYPSSTKEYQEVIHEETGTLLRVPFRRIHLTDPDPGCSHIDVYDTSGPLGYDPKYGLPKLREAWVKRREERGDERFTQMHYAKRGIITEEMAYVAAREGMDAEFVRSEVARGRAIIPSNRYHTELEPMIIGRMFKVK 223

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A6T5LU33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LU33_HETAK)

HSP 1 Score: 253 bits (647), Expect = 2.970e-78
Identity = 117/154 (75.97%), Postives = 132/154 (85.71%), Query Frame = 0

Query:   24 TADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            T DPFNP+F E  SFG+AYP STK+YKEV H  TG  +RVPFRRIHL+D DPGC HLDVYDT+GP G  PR+G+P +R EWIKRREE GDE +TQMYYAKKG++TEEMAYVAAREGMDPEFVRSEV RGRAII SNKRH+ELEP IIGR+FKV+
Sbjct:   60 TKDPFNPEFRETTSFGEAYPSSTKEYKEVVHEETGALLRVPFRRIHLTDEDPGCGHLDVYDTSGPQGFSPREGIPKLREEWIKRREERGDERYTQMYYAKKGIVTEEMAYVAAREGMDPEFVRSEVARGRAIICSNKRHLELEPQIIGRMFKVK 213

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A4D9D219_9STRA (ThiC-associated domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D219_9STRA)

HSP 1 Score: 233 bits (595), Expect = 9.750e-71
Identity = 108/162 (66.67%), Postives = 129/162 (79.63%), Query Frame = 0

Query:   16 AGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            AG GR K T DP+NPDF    +F +AYP+ TK+Y  V H  TG  M VPFRRIHL+D DPGC HLD+YDT+GP G +PR+GLP +R  W+ RRE+ GD   TQM+YAK+G++TEEMAYVAAREGMDP+FV SEV RGRAIIPSNKRH+ELEPMI+GR FKV+
Sbjct:   32 AGSGRSKPTKDPYNPDFIRPLTFEEAYPKCTKEYIPVTHEGTGEVMSVPFRRIHLADTDPGCEHLDLYDTSGPQGVNPREGLPKLRKSWVGRREQKGDATPTQMWYAKQGIVTEEMAYVAAREGMDPQFVLSEVARGRAIIPSNKRHLELEPMIVGRNFKVK 193

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A1Q9EQ11_SYMMI (Phosphomethylpyrimidine synthase, chloroplastic n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EQ11_SYMMI)

HSP 1 Score: 225 bits (574), Expect = 2.160e-67
Identity = 103/163 (63.19%), Postives = 130/163 (79.75%), Query Frame = 0

Query:   15 KAGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            ++  GR + T+DP+NP+F +   F +AYP S K YKEV +  TG ++++PFRRIHL+D DPGC HLDVYDT+GP GADPRKGL  +R +WI+ RE + D   TQMYYAK+GVIT+EMA++AAREGMDPEFVRSE+ RGRAIIP+N+ H E EPMIIGR FKV+
Sbjct:   61 RSRSGRSRPTSDPYNPEFKDAFQFKEAYPSSEKIYKEVVYEATGEKLKIPFRRIHLTDEDPGCDHLDVYDTSGPPGADPRKGLAKLRKKWIEGREVAEDGTCTQMYYAKQGVITQEMAFIAAREGMDPEFVRSELARGRAIIPANRNHPESEPMIIGRHFKVK 223

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A7S2QJG1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QJG1_9DINO)

HSP 1 Score: 209 bits (531), Expect = 3.140e-66
Identity = 99/152 (65.13%), Postives = 122/152 (80.26%), Query Frame = 0

Query:   28 FNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDE--VFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            +NP F ++  F +AYP S K YK V +  TG  +R+P RRI+LSD DPGC HLDVYDT+GPL  DPR+GLP +RA+WI  RE++  E  V TQM+YAK+G+ITEEMA++AAREGMDPEFVRSEV RGRAIIPSN++H E+EPMIIGR FKV+
Sbjct:    1 YNPQFKDMLQFKEAYPGSEKIYKGVTYEPTGETLRIPCRRINLSDEDPGCDHLDVYDTSGPLNIDPRQGLPKLRAQWIAAREKTFGEGHVCTQMHYAKQGIITEEMAFIAAREGMDPEFVRSEVARGRAIIPSNRKHPEIEPMIIGRKFKVK 152

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A7S4VML7_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VML7_9DINO)

HSP 1 Score: 223 bits (567), Expect = 4.460e-66
Identity = 105/163 (64.42%), Postives = 126/163 (77.30%), Query Frame = 0

Query:   17 GDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRRE--ESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            G GR K T+DP+NP F +V  F +AYP S K Y+EV H  TG  ++VPFRRIHLSD DPGC HLDVYDT+GPLG  PR+GLP +R  W+  RE  +      TQM+YAK+G++TEEMA+VAAREGMDPEFVR+EV RGRAIIPSN++H E EPMIIGR FKV+
Sbjct:  101 GAGRTKPTSDPYNPQFRDVLQFQEAYPNSEKLYREVTHTPTGETLQVPFRRIHLSDEDPGCGHLDVYDTSGPLGVIPREGLPKLRKAWVAAREAADGPGARCTQMHYAKRGIVTEEMAFVAAREGMDPEFVRAEVARGRAIIPSNRKHPESEPMIIGRKFKVK 263

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A7S2VR37_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VR37_9DINO)

HSP 1 Score: 218 bits (556), Expect = 1.220e-64
Identity = 104/160 (65.00%), Postives = 125/160 (78.12%), Query Frame = 0

Query:   20 RVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVF--TQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            R K T+DP+NP F ++  F +AYP S K YK+V +  TG  +R+PFRRIHLSD DPGC HLDVYDT+GPL  DPR+GLP +RA WI  RE    E    TQM+YAK+GV+T+EMA++AAREGMDPEFVRSEV RGRAIIPSN++H E EPMIIGR FKV+
Sbjct:   79 RSKPTSDPYNPQFKDMLQFKEAYPGSEKLYKDVTYEPTGETLRIPFRRIHLSDEDPGCGHLDVYDTSGPLNVDPRQGLPKLRAPWIAAREAEFGEGHRCTQMHYAKQGVVTQEMAFIAAREGMDPEFVRSEVARGRAIIPSNRKHPESEPMIIGRKFKVK 238

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A7S3TGH3_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TGH3_9SPIT)

HSP 1 Score: 213 bits (543), Expect = 1.110e-62
Identity = 101/167 (60.48%), Postives = 126/167 (75.45%), Query Frame = 0

Query:   13 QIKAGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRRE--ESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            Q   G  R + T+DP+NP F ++ +F +A+P+S K YKEV H  TG  +RVP RRIHL D D GC HLDVYDT+GPL  DPR+G P +RA+WI+ RE  +   +  TQMYYAK+G+ITEEM+++AAREGMDPEFVRSEV RGR IIP+N+ H E EPMIIGR FKV+
Sbjct:   79 QQPEGPERSRPTSDPYNPQFKDMVNFQEAFPKSEKFYKEVVHEPTGEVLRVPCRRIHLDDEDEGCGHLDVYDTSGPLNIDPREGQPKLRAKWIEAREARDGAGQRCTQMYYAKRGIITEEMSFIAAREGMDPEFVRSEVARGRGIIPANRNHPESEPMIIGRKFKVK 245

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BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Match: A0A7S0ZI78_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI78_9RHOD)

HSP 1 Score: 212 bits (540), Expect = 1.520e-62
Identity = 102/162 (62.96%), Postives = 124/162 (76.54%), Query Frame = 0

Query:   16 AGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYKEVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVR 177
            A   + + TADP+NP+F +  +F   YP STK+Y  V H  TG ++ +P RR+HLS+   G S +D+YDT+GP G DPR+GLP VR EWIKRRE  GD+ FTQM+YA+K +ITEEM YVA REG+DPEFVRSEV RGRAIIPSNKRH ELEPMIIGR FKV+
Sbjct:   54 ASKKKSRPTADPYNPEFLQKPTFESCYPNSTKEYTPVVHEPTGEKLWIPNRRVHLSE---GESPVDLYDTSGPQGIDPREGLPKVRKEWIKRREARGDKTFTQMHYARKNMITEEMLYVAVREGLDPEFVRSEVARGRAIIPSNKRHTELEPMIIGRNFKVK 212

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot

BLAST of mRNA_H-elongata_contig103738.313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRY4_ECTSI	1.280e-104	84.53	ThiC-associated domain-containing protein n=2 Tax=...	[more]
A0A835Z789_9STRA	2.560e-80	69.49	ThiC family-domain-containing protein n=1 Tax=Trib...	[more]
A0A6T5LU33_HETAK	2.970e-78	75.97	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9D219_9STRA	9.750e-71	66.67	ThiC-associated domain-containing protein n=2 Tax=...	[more]
A0A1Q9EQ11_SYMMI	2.160e-67	63.19	Phosphomethylpyrimidine synthase, chloroplastic n=...	[more]
A0A7S2QJG1_9DINO	3.140e-66	65.13	Hypothetical protein (Fragment) n=1 Tax=Brandtodin...	[more]
A0A7S4VML7_9DINO	4.460e-66	64.42	Hypothetical protein n=3 Tax=Alexandrium monilatum...	[more]
A0A7S2VR37_9DINO	1.220e-64	65.00	Hypothetical protein n=2 Tax=Brandtodinium nutricu...	[more]
A0A7S3TGH3_9SPIT	1.110e-62	60.48	Hypothetical protein n=1 Tax=Strombidinopsis acumi...	[more]
A0A7S0ZI78_9RHOD	1.520e-62	62.96	Hypothetical protein (Fragment) n=1 Tax=Timspurcki...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025747	ThiC-associated domain	PFAM	PF13667	ThiC-associated	coord: 42..110 e-value: 1.1E-9 score: 37.9
IPR002817	Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B	PFAM	PF01964	ThiC_Rad_SAM	coord: 117..176 e-value: 8.1E-16 score: 57.8
IPR002817	Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B	PANTHER	PTHR30557	THIAMINE BIOSYNTHESIS PROTEIN THIC	coord: 22..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig103738	contig	H-elongata_contig103738:421..1310 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig103738.313.1	mRNA_H-elongata_contig103738.313.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig103738 421..1316 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig103738.313.1 ID=prot_H-elongata_contig103738.313.1|Name=mRNA_H-elongata_contig103738.313.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MVASPPRLDFPGQIKAGDGRVKRTADPFNPDFHEVASFGDAYPESTKDYK
EVAHATTGHRMRVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSV
RAEWIKRREESGDEVFTQMYYAKKGVITEEMAYVAAREGMDPEFVRSEVE
RGRAIIPSNKRHVELEPMIIGRLFKVR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025747	ThiC-associated_dom
IPR002817	ThiC/BzaA/B