prot_H-elongata_contig103711.310.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103711.310.1
Unique Nameprot_H-elongata_contig103711.310.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length531
Homology
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 444 bits (1142), Expect = 5.800e-136
Identity = 252/546 (46.15%), Postives = 335/546 (61.36%), Query Frame = 0
Query:    1 RQGPSTPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDKPPREDPATIAEAKARAAKYAHEPPKGTPPPIAEIDQPFEPSAIGDAIRKVNSQTAPGPSGLRHCYLQDVRDDDLEVDIARLSRTIFKSEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQ----LVGHFEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVI---AAPGANAAGLASPD----------------EARLPIREGGYGLTSSADIRDAAFIGSQALVLARAV 523
            RQG     ++  RA  L H+RGG++KAAS L++P + PRN  TL  LR K P E    IAEA   A      PP G    I  +++PF    +   IR+ N Q +PGPSGLR   LQ     +L   IA+L   IF    LP  FW LHT +NLS +G K RP+A GD+FRRI+G +  +Q    L  HFEP+ Q+GVA PGG +L+A    L   +G  +L++D +NAFNS+ R A LPALA ++P    YA N+YAR+PPKLL+  D+G  AVI SA GVQQGCNLG LC+SAG + LL+ FR NPPV GA +  F+DD+ +LLP   A +  A    TTW+Q   + +G+ LNR+KS++L   G    + P   R  LE T+L+VAEGGMR++GV VG  +Y +       RGEP  LL+E+A ++DAQAS QILR SAA R  F+LR++PPD+TK    EFD+ +E +L T++   + PG +A    + +                +ARLP+REGG G+ S+ DI   AFIG QALVLARA+
Sbjct: 1074 RQGEEA--SKHARAEHLAHQRGGLSKAASTLLAPPSPPRNAETLETLRKKHPGESQQEIAEACCEATARLSRPPPGVSR-IEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGM-AVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAFIGGQALVLARAL 1615          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 2.210e-133
Identity = 242/543 (44.57%), Postives = 322/543 (59.30%), Query Frame = 0
Query:    6 TPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDKPPREDPATIAEAKARAAKYAHEPPKGTP-PPIAEIDQPFEPSAIGDAIRKVNSQTAPGPSGLRHCYLQDVRDDDLEVD-IARLSRTIFK-SEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGH----FEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEAR--------------------LPIREGGYGLTSSADIRDAAFIGSQALVLAR 521
            T + R+ RA +L HE GGITKAASALISP  +PRN  TL  LR+  P EDP  IA A   + K A +  K      +AE D+PFE   I   ++K N Q+APGP GLR  YLQ     D   + +A  S  +F   + LP  FW LHT +NLS LG K RP+A G V RRII   F  Q  G     FE   Q G   PGG +++A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQGCNLGG  F  G + +++ F + PPV GA +  +VDD+ + LPP  A++ +AIA  T W+Q      GIEL+  KS+VL   G   ++L   ++R L +T LSVAEGGM ++GV VGTE +QR FV  F RG PA+L+R L+ ++D QAS+Q+LRLS   R   +LRT+ P IT     E D ++ W+++ ++    AN  G+ + +E R                    LPIREGG G+TSS  IR++AF+  QALV ++
Sbjct:   37 TEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSK 579          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 9.990e-126
Identity = 234/546 (42.86%), Postives = 322/546 (58.97%), Query Frame = 0
Query:    6 TPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDKPPREDPATIAEAKARAAKYAHEPPKGTP-PPIAEIDQPFEPSAIGDAIRKVNSQTAPGPSGLRHCYLQDVRDDDLEVD-IARLSRTIFK-SEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGH----FEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEAR---------------------LPIREGGYGLTSSADIRDAAFIGSQALVLARAV 523
            T + R+ RA +L HE GGITKAASALISP  +PRN  TL  LR+  P EDP  IA A   + K A +  K      +AE D+PFE   I   ++K N Q+APGP GLR  YLQ     D   + +A  S  +F   + LP  FW LHT +NLS LG K RP+A G V RRII   F +Q  G     FE   Q G   PGG +++A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQGCNLGG  F  G + +++ F + PPV G  +  +VDD+   LPP  A++ +AI+  T W+Q+     GIEL+  KS+VL   G   ++L   +++ L +  LSV EGGM V+G+ VGTEE+QR FV    RG+PA+L+  LA ++D QAS+Q+LRLS   R   +LRT+ P IT +  +  D M+ W+++ ++    A++  + +  E R                     LP+REGG G+TS+  IR++AF+  QALV +++V
Sbjct:   37 TEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 582          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 1.850e-124
Identity = 235/546 (43.04%), Postives = 322/546 (58.97%), Query Frame = 0
Query:    6 TPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDKPPREDPATIAEAKARAAKYAHEPPKGTP-PPIAEIDQPFEPSAIGDAIRKVNSQTAPGPSGLRHCYLQ-DVRDDDLEVDIARLSRTIFK-SEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGH----FEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEAR---------------------LPIREGGYGLTSSADIRDAAFIGSQALVLARAV 523
            T + R+ RA +L HE GGITKAASALISP  +PRN  TL  LR+  P EDP  IA A   + K A +  K      +AE D+PFE   I   ++K N Q+APGP GLR  YLQ     D     +A  S  +F   + LP  FW LHT +NLS LG K RP+A G V RRII   F +Q  G     FE   Q G   PGG +++A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQGCNLGG  F  G + +++ F + PPV G  +  +VDD+   LPP  A++ +AI+  T W+Q+     GIEL+  KS+VL   G   ++L   +++ L +  LSVAEGGM V+G+ VGTEE+QR FV    RG+PA+L+  LA ++D QAS+Q+LRLS   R   +LRT+ P IT +  +  D M+ W+++ ++    A++  + +  E R                     LP+REGG G+TS+  IR++AF+  QALV +++V
Sbjct:   37 TEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 582          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 1.400e-101
Identity = 182/415 (43.86%), Postives = 251/415 (60.48%), Query Frame = 0
Query:  133 RTIFKSEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGH----FEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGL-------ASP---------DEAR----LPIREGGYGLTSSADIRDAAFIGSQALVLARAV 523
            +  +  + LP  FW LHT +NLS LG K RP+A G V RRII   F +Q  G     FE   Q G   PGG +++A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P  + Y  N+YAR   KLLF M++G+  V+ S RGVQQGCNLGG  F  G + +++ F + PPV GA +  +VDD+ + LPP  A++ +AIA  T W+Q      GIEL+  KS VL   G   ++L   ++R L +T LSVAEGGM ++GV VGTE +QR FV  F RG PA+L+  L+ ++D Q S+Q+LR+S   R   +LRT+ P IT     E D ++ W+++ ++    AN  G+       A+P         D AR    LPIREGG G+TSS  IR++AF+  QALV +++V
Sbjct:   15 KVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSKSV 429          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 1.130e-92
Identity = 173/416 (41.59%), Postives = 249/416 (59.86%), Query Frame = 0
Query:  133 RTIFKSEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGH----FEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEAR---------------------LPIREGGYGLTSSADIRDAAFIGSQALVLARAV 523
            +  +  + LP   W LHT +NLS LG K RP+A G V RRII   F +Q  G     FE   Q G   PGG +++A   +L   +G TILSFDGKNA+NS+ R + LPA+AT+ P    Y  N+YAR   KLLF M++G+  V+ S RGVQQGCNLGG  F  G + +++ F + PPV G  +  +VDD+   LPP  A++ +AI+  T W+Q+     GIEL+  KS+VL   G   ++L   +++ L +  LSVAEGGM V+G+ VGTEE+QR FV    RG+PA+L+  LA ++D QAS+Q+LRLS   R   +LRT+ P IT +  +  D M+ W+++ ++    A++  + +  E R                     LP+REGG G+TS+  IR++AF+  QALV +++V
Sbjct:   15 KVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFVAGQALVFSKSV 430          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 2.290e-86
Identity = 165/361 (45.71%), Postives = 215/361 (59.56%), Query Frame = 0
Query:    6 TPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDKPPREDPATIAEAKARAAKYAHEPPKGTP-PPIAEIDQPFEPSAIGDAIRKVNSQTAPGPSGLRHCYLQDVRDDDLEVD-IARLSRTIFK-SEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGH----FEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVL 359
            T + R+ RA +L HE GGITKAASALISP  +PRN  TL  LR+  P EDP  IA A   + K A +  +      +AE D+PFE   I   ++K N Q+APGP GLR  YLQ     D   + +A  S  +F   + LP  FW LHT +NLS LG K RP+A G V RRII   F +Q  G     FE   Q G   PGG +++A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQGCNLGG  F  G + +++ F + PPV G  +  +VDD+   LPP  A++ +AI+  T W+Q+     GIEL+  KS+VL
Sbjct:   37 TEDNRQRRATRLAHESGGITKAASALISPAPSPRNNDTLEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDSVAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 7.570e-64
Identity = 119/278 (42.81%), Postives = 170/278 (61.15%), Query Frame = 0
Query:  264 MDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEAR--------------------LPIREGGYGLTSSADIRDAAFIGSQALVLAR 521
            M++G+  ++ S RGVQQGCNLGG  FS G +  ++ F D PPV GA +  +VDD+ + LPP  A++ +AIA  T W+Q      GIEL+  KS+VL   G   ++L   ++R L +T LSVAEGGM ++GV VGTE +QR FV  F RG PA+L+R L+ ++D QAS+Q+LRLS   R   +LRT+ P IT     E D ++ W+++ ++    AN  G+ + +E R                    LPIREGG G+TSS  IR++AF+  QALV ++
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFVAGQALVFSK 278          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 6.290e-48
Identity = 100/247 (40.49%), Postives = 146/247 (59.11%), Query Frame = 0
Query:  297 LQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEAR--------------------LPIREGGYGLTSSADIRDAAFIGSQALVLARAV 523
            ++ F D PPV GA +  +VDD+++ LPP  A++ +AIA  T W+Q       IEL+  KS+VL   G   ++L   ++R L +T LSVAEGGM ++GV VGTE +QR FV  F RG PA+L+R L+ ++D QAS+Q+LRLS   R   +LRT  P IT     E D ++ W+++ ++    AN  G+ + +E R                    LPIREGG  +T S  IR++AF+  QALV +++V
Sbjct:    1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAFVAGQALVFSKSV 247          
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 6.760e-46
Identity = 144/477 (30.19%), Postives = 219/477 (45.91%), Query Frame = 0
Query:    6 TPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDKPPREDPATIAEA--KARAAKYAHEPPKGTPPPIAEIDQPFEPSAIGDAIRKVNSQTAPGPSGLRHCYLQDV------RDDDLEVDIARLSRTIFKSEILPPLFWALHTGSNLSTLGAKARPVACGDVFRRII--GTI--FSKQLVGHFEPKEQHGVACPGGFDLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAVNLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRFRDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIELNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEEYQRGF-VEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVPPDITKAPMEEFDRMLEWSL 469
            TP+ +  RAA+     GG+  AA AL++   +P N  T + L+ K P EDP  + +A  +A+AA    E     P    E +  F+P  +   I   +S +  G  G R  +L+ +      R++      +   R I      PP FW L   S+L  LG K RPV  G  +RR+I  GT+  +  +L   F   +Q GVA  GG + +A    L    G  ++  D  NAFN+  R A +   A  VP   GY    Y   P K ++ MD+G    I+   GVQQG  +G   F    + ++ + R      G  +  ++DDI++      A++ + I         E EA+GI +NR KS  L   G   A  PA +RR+L +  L +AE G+ V+GV +GT+ Y     ++    G   KL R L  M D Q +  +   S   R+ ++ R +   + +   E  D M+ W L
Sbjct:  307 TPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETE--FDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVD----ELEAVGIIVNRGKSSALHPPGRDVA--PA-ERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGINHKLVRGACERLDNMVMWVL 774          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103711.310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN5.800e-13646.15Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KGJ4_9PHAE2.210e-13344.57Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE9.990e-12642.86Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE1.850e-12443.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.400e-10143.86Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE1.130e-9241.59Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE2.290e-8645.71Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE7.570e-6442.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JL76_9PHAE6.290e-4840.49Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI32_9PHAE6.760e-4630.19Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 161..394
e-value: 2.4E-10
score: 40.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 129..396
score: 8.609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103711contigH-elongata_contig103711:659..2314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103711.310.1mRNA_H-elongata_contig103711.310.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103711 659..2314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103711.310.1 ID=prot_H-elongata_contig103711.310.1|Name=mRNA_H-elongata_contig103711.310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=531bp
RQGPSTPETRRLRAAKLVHERGGITKAASALISPDAAPRNGITLSILRDK
PPREDPATIAEAKARAAKYAHEPPKGTPPPIAEIDQPFEPSAIGDAIRKV
NSQTAPGPSGLRHCYLQDVRDDDLEVDIARLSRTIFKSEILPPLFWALHT
GSNLSTLGAKARPVACGDVFRRIIGTIFSKQLVGHFEPKEQHGVACPGGF
DLMARAVSLGFAEGCTILSFDGKNAFNSIYRRAFLPALATVVPVASGYAV
NLYARDPPKLLFAMDNGTTAVIDSARGVQQGCNLGGLCFSAGGISLLQRF
RDNPPVEGASIFCFVDDINILLPPAKAQDAEAIAKATTWVQKEREAIGIE
LNRAKSQVLLARGASAATLPAGQRRILEETELSVAEGGMRVLGVAVGTEE
YQRGFVEAFMRGEPAKLLRELAPMEDAQASFQILRLSAAVRTTFILRTVP
PDITKAPMEEFDRMLEWSLATVIAAPGANAAGLASPDEARLPIREGGYGL
TSSADIRDAAFIGSQALVLARAVAKVARSDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom