prot_H-elongata_contig103566.297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103566.297.1
Unique Nameprot_H-elongata_contig103566.297.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.090e-41
Identity = 76/100 (76.00%), Postives = 84/100 (84.00%), Query Frame = 0
Query:    2 THNAKKLILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            T   + L+  F K  +ILRNLGV KV+LWPRFHSLVAESLER PP+VEELVQGLT PTKEVQQAIVVLMDHTL+ELR +APSLD  ELTVESCIF +FDR
Sbjct:  295 TDEPESLLAGFGKLEKILRNLGVAKVFLWPRFHSLVAESLERRPPQVEELVQGLTAPTKEVQQAIVVLMDHTLRELRGAAPSLDSAELTVESCIFNSFDR 394          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.500e-41
Identity = 76/100 (76.00%), Postives = 85/100 (85.00%), Query Frame = 0
Query:    2 THNAKKLILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            T   + L+  F K  +ILRNLGV KV+LWPRFHSLVAESLER PP+VEELVQGLT PTKEVQQAIVVLMDHTL+ELR +APSLD +ELTVESCIF +FDR
Sbjct:  280 TDEPESLLAGFGKLEKILRNLGVGKVFLWPRFHSLVAESLERRPPQVEELVQGLTAPTKEVQQAIVVLMDHTLRELRGAAPSLDSSELTVESCIFNSFDR 379          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: A0A087UTI3_STEMI (DNA repair endonuclease XPF (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UTI3_STEMI)

HSP 1 Score: 84.3 bits (207), Expect = 7.270e-17
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   12 FSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            FS+  +I+RNL V  ++LWPRFH++VA S+E+  PEV E+   +T     +Q A++ LM   +KEL+   PSLD  ELTVE+ +  AFD+
Sbjct:  166 FSQVQRIMRNLFVKNLFLWPRFHAVVASSIEKAKPEVFEIHVSMTSAMTSIQIALLDLMSFCVKELKHINPSLDTDELTVENAVAKAFDK 255          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: A0A4Y2HR43_ARAVE (DNA repair endonuclease XPF n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2HR43_ARAVE)

HSP 1 Score: 84.3 bits (207), Expect = 7.320e-17
Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    1 MTHNAKKLILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            ++ NA      FS+  +++RNL V  ++LWPRFH++VA S+ER  P+VEE+   +T     +Q A++ LM+  +KEL+    SLD  ELTVE+ I  +FD+
Sbjct:  153 ISSNAAAFTRGFSQVQRVMRNLFVKNLFLWPRFHAVVASSIERAKPDVEEIHVPMTNAMTSIQMALLDLMNVCVKELKHINASLDTDELTVENAIAKSFDK 253          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: UPI001CA842C1 (DNA repair endonuclease XPF n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA842C1)

HSP 1 Score: 80.9 bits (198), Expect = 1.220e-15
Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    2 THNAKKLILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDRF 102
            T +A    + FS+  +++R L VTK+YLWPRFHS V + L +  PEV EL   LT     +Q A++ +M++ +KEL+R+   L+  ELTVE+ +   F +F
Sbjct:  293 TSSALSFTVGFSQVERVMRTLFVTKLYLWPRFHSTVKKCLSKREPEVVELHVSLTPKMLSIQTALLDIMNYIVKELKRNNKFLELDELTVENAVAKKFHKF 393          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: A0A2L2YQH5_PARTP (DNA repair endonuclease XPF (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YQH5_PARTP)

HSP 1 Score: 78.2 bits (191), Expect = 3.640e-15
Identity = 38/90 (42.22%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   12 FSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            F++  +++RNL V  +++WPRFH++VA SLER  P+V E+   +T     +Q +++ LM+  +KEL+   PSLD  ELTVE+ I  +FD+
Sbjct:  163 FAQVQRVMRNLFVKHLFIWPRFHAVVASSLERAKPDVMEMHVPMTLAMTSIQISLLDLMNVCVKELKHINPSLDTDELTVENAIAKSFDK 252          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: K0T254_THAOC (ERCC4 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T254_THAOC)

HSP 1 Score: 79.0 bits (193), Expect = 5.720e-15
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    2 THNAKKLILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLD 85
            T N   L+  F+K  ++L+ L V K+YL+PRFHS VAE LE+NPP+VEEL Q LTG   E+Q  +   +   +++L++  P +D
Sbjct:   52 TDNPSALLRGFAKVEKVLKALQVPKLYLYPRFHSAVAEELEQNPPKVEELHQPLTGKMNEIQDTLAAAIRANIRDLKQKCPLID 135          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: UPI00077FC624 (DNA repair endonuclease XPF isoform X1 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077FC624)

HSP 1 Score: 78.6 bits (192), Expect = 7.790e-15
Identity = 38/90 (42.22%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   12 FSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            F++  +++RNL V  +++WPRFH++VA SLER  P+V E+   +T     +Q +++ LM+  +KEL+   PSLD  ELTVE+ I  +FD+
Sbjct:  163 FAQVQRVMRNLFVKHLFIWPRFHAVVASSLERAKPDVMEMHVPMTMAMTSIQISLLDLMNVCVKELKHINPSLDTDELTVENAIAKSFDK 252          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: A0A261XZ07_9FUNG (1-alkyl-2-acetylglycerophosphocholine esterase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XZ07_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 7.950e-15
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   12 FSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFD 100
            F+     L+NL + KV+LWPRFH  V+ +LE    +V EL Q L+   + +Q AI+  MD  L ELRRS P++D  E TVE+ +F +FD
Sbjct:  168 FAPLQNTLKNLMLRKVHLWPRFHLTVSHTLEVYKADVIELRQPLSDNMESIQHAIIECMDACLSELRRSCPTVDVEEFTVENALFKSFD 256          
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Match: A0A443NC47_9MAGN (ERCC4 domain-containing protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NC47_9MAGN)

HSP 1 Score: 78.2 bits (191), Expect = 1.080e-14
Identity = 41/94 (43.62%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    8 LILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEELVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFDR 101
            +I AF+K  +I++ L + +++LWPRFH LV+E LE+ PPEV ++   L+   K +Q+A+V  MD  LKELR++   +D  +LTVE+ +F +FD 
Sbjct:  167 MISAFAKAERIMKCLFIRRLHLWPRFHVLVSEQLEKTPPEVVDVRVPLSPLMKGIQKAVVGAMDACLKELRKTN-KVDVDDLTVENGLFKSFDE 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103566.297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH45_ECTSI1.090e-4176.00ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JEA6_9PHAE1.500e-4176.00ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A087UTI3_STEMI7.270e-1745.56DNA repair endonuclease XPF (Fragment) n=2 Tax=Ste... [more]
A0A4Y2HR43_ARAVE7.320e-1741.58DNA repair endonuclease XPF n=1 Tax=Araneus ventri... [more]
UPI001CA842C11.220e-1540.59DNA repair endonuclease XPF n=1 Tax=Leptopilina he... [more]
A0A2L2YQH5_PARTP3.640e-1542.22DNA repair endonuclease XPF (Fragment) n=1 Tax=Par... [more]
K0T254_THAOC5.720e-1544.05ERCC4 domain-containing protein n=1 Tax=Thalassios... [more]
UPI00077FC6247.790e-1542.22DNA repair endonuclease XPF isoform X1 n=1 Tax=Par... [more]
A0A261XZ07_9FUNG7.950e-1544.941-alkyl-2-acetylglycerophosphocholine esterase n=1... [more]
A0A443NC47_9MAGN1.080e-1443.62ERCC4 domain-containing protein n=1 Tax=Cinnamomum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103566contigH-elongata_contig103566:128..1190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103566.297.1mRNA_H-elongata_contig103566.297.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103566 128..1190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103566.297.1 ID=prot_H-elongata_contig103566.297.1|Name=mRNA_H-elongata_contig103566.297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MTHNAKKLILAFSKFVQILRNLGVTKVYLWPRFHSLVAESLERNPPEVEE
LVQGLTGPTKEVQQAIVVLMDHTLKELRRSAPSLDGTELTVESCIFTAFD
RF
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