prot_H-elongata_contig10352.292.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10352.292.1
Unique Nameprot_H-elongata_contig10352.292.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: D8LJA8_ECTSI (Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759 RepID=D8LJA8_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 3.500e-86
Identity = 143/159 (89.94%), Postives = 148/159 (93.08%), Query Frame = 0
Query:    9 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRKKVAAEARAQEASA 167
            IS+  + +N  +LVKDGLVIRLP VVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGE ARIKALKEQAEARK KAKQ+NERKEDRKK AAEARA E SA
Sbjct:   32 ISLANSRQNIRKLVKDGLVIRLPQVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGETARIKALKEQAEARKLKAKQKNERKEDRKKAAAEARAAEVSA 190          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A835ZKQ0_9STRA (Ribosomal protein L19 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKQ0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.730e-59
Identity = 106/157 (67.52%), Postives = 126/157 (80.25%), Query Frame = 0
Query:    9 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRKKVAAEARAQEA 165
            IS+  + +N  +L KDGL+I+ P V+HSRARV  R+EAK+KGRHTGPGKR GTANARLPFKL+W RRMR+LRRMLRKYR+AKK+DKHLYH+LY+ CKGNQFKNKRVLMEAIHK K E  R +AL EQAEARK KA  + +RK  + + AA A   EA
Sbjct:   32 ISLANSRQNIRKLKKDGLIIKKPTVIHSRARVLARNEAKRKGRHTGPGKRHGTANARLPFKLLWMRRMRVLRRMLRKYRDAKKVDKHLYHKLYMLCKGNQFKNKRVLMEAIHKMKAETLRERALVEQAEARKAKASAKKDRKAKKAEEAAAAAQPEA 188          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: K3X7E5_GLOUD (Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X7E5_GLOUD)

HSP 1 Score: 188 bits (478), Expect = 5.580e-58
Identity = 101/150 (67.33%), Postives = 121/150 (80.67%), Query Frame = 0
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 150
            ++P   T +++  + +N  +LVKDG +I+ P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E AR K LKEQ+EARK KAK   +RK
Sbjct:   24 LDPNESTELALANSRQNIRKLVKDGFIIKKPEVIHSRARFQKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERAREKTLKEQSEARKEKAKNARDRK 173          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A067BLM6_SAPPC (Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLM6_SAPPC)

HSP 1 Score: 184 bits (467), Expect = 1.730e-56
Identity = 99/150 (66.00%), Postives = 121/150 (80.67%), Query Frame = 0
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 150
            ++P   T I++  + +N  +LVKDG VIR P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RRMR+LRR+LRKYR+AKKID+H+YH+LY+  KGNQFKNKRVLME IHK K E  R KALK+Q+EARK KA+   +RK
Sbjct:   24 LDPNESTEIALANSRQNIRKLVKDGFVIRKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRMRVLRRLLRKYRDAKKIDRHMYHDLYMRAKGNQFKNKRVLMEVIHKLKSEHIREKALKDQSEARKEKARNARDRK 173          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A7S2V357_9STRA (Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V357_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.120e-55
Identity = 102/146 (69.86%), Postives = 120/146 (82.19%), Query Frame = 0
Query:    9 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRK 154
            IS+  + +N  +LVKDGLVIR P VVHSRARV  R+EAK KGRHTG GKR GTANARLPFKLIW RR R+LRR+LRKYR+AKKIDKHLYH+LY+  KGNQFKNK+VLMEAIH+ K E AR KAL +QAEARK +A+ +  RK ++K
Sbjct:   32 ISMANSRQNIRKLVKDGLVIRKPQVVHSRARVVERNEAKAKGRHTGYGKRHGTANARLPFKLIWMRRARVLRRLLRKYRDAKKIDKHLYHDLYMRSKGNQFKNKKVLMEAIHRMKAEKAREKALADQAEARKTRARMKAARKAEKK 177          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: M4C2P1_HYAAE (Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=2759 RepID=M4C2P1_HYAAE)

HSP 1 Score: 182 bits (461), Expect = 1.600e-55
Identity = 99/150 (66.00%), Postives = 118/150 (78.67%), Query Frame = 0
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 150
            ++P     I++  + +N  +LVKDG VI+ P V+HSRAR   R+EAK+KGRHTG GKR GTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ++ARK KAK   ERK
Sbjct:   24 LDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRHGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSDARKEKAKSARERK 173          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A484E6K8_BRELC (Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6K8_BRELC)

HSP 1 Score: 181 bits (458), Expect = 4.420e-55
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 0
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK 150
            ++P     I++  + +N  +LVKDG VI+ P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YH+LY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KA+   +RK
Sbjct:   24 LDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHDLYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKARLARDRK 173          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A7S2G695_9STRA (Ribosomal protein L19 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G695_9STRA)

HSP 1 Score: 180 bits (457), Expect = 8.570e-55
Identity = 100/154 (64.94%), Postives = 121/154 (78.57%), Query Frame = 0
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDRK 154
            ++P     IS+  + +N  +L+KDG V + P VVHSR+RV    +AK+KGRHTG GKR+GTA+ARLP K++W RRMR+LRR+LRKYREAKKID+HLYHELY+ CKGNQFKNKRVLMEAIHK K   AR KAL EQA+ARK KAK + ERK  RK
Sbjct:   24 LDPNESNEISMANSRQNIRKLIKDGFVFKKPQVVHSRSRVMRHLDAKRKGRHTGYGKRKGTADARLPLKVLWMRRMRVLRRLLRKYREAKKIDRHLYHELYMRCKGNQFKNKRVLMEAIHKMKAGKAREKALMEQADARKNKAKAKTERKMKRK 177          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A3F2RJK4_9STRA (Ribosomal_L19e domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJK4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.240e-54
Identity = 98/144 (68.06%), Postives = 116/144 (80.56%), Query Frame = 0
Query:    1 INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAK 144
            ++P     I++  + +N  +LVKDG VI+ P V+HSRAR   R+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+LRKYREAKKIDKH+YHELY+  KGNQFKNKRVLME IHK K E  R K LKEQ+EARK KAK
Sbjct:  104 LDPNESNEIALANSRQNIRKLVKDGFVIKKPQVIHSRARFTKRNEAKRKGRHTGIGKRRGTANARLPFKVIWMRRIRVLRRLLRKYREAKKIDKHIYHELYMRSKGNQFKNKRVLMETIHKMKAERHREKTLKEQSEARKEKAK 247          
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Match: A0A6U3PTD9_9STRA (Ribosomal protein L19 n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A6U3PTD9_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.300e-54
Identity = 98/145 (67.59%), Postives = 119/145 (82.07%), Query Frame = 0
Query:    9 ISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKGRHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHELYLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERKEDR 153
            IS+  + RN ++L KDGL+I+ P VVHSRARV LR+EAK+KGRHTG GKRRGTANARLPFK+IW RR+R+LRR+L+K R+AKKIDKH+YH LY+  KGNQFKNKRVL+E IH  K E A+ KAL EQAEARK +A+ R  RK +R
Sbjct:   32 ISLANSRRNVARLHKDGLIIKKPVVVHSRARVALRNEAKRKGRHTGTGKRRGTANARLPFKVIWMRRIRVLRRLLKKMRDAKKIDKHIYHSLYMLAKGNQFKNKRVLLETIHTMKAEKAKEKALAEQAEARKGRARARLARKAER 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10352.292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA8_ECTSI3.500e-8689.94Ribosomal protein L19 n=2 Tax=Eukaryota TaxID=2759... [more]
A0A835ZKQ0_9STRA2.730e-5967.52Ribosomal protein L19 n=2 Tax=Tribonema minus TaxI... [more]
K3X7E5_GLOUD5.580e-5867.33Ribosomal protein L19 n=2 Tax=Pythiaceae TaxID=478... [more]
A0A067BLM6_SAPPC1.730e-5666.00Ribosomal protein L19 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A7S2V357_9STRA1.120e-5569.86Ribosomal protein L19 n=1 Tax=Fibrocapsa japonica ... [more]
M4C2P1_HYAAE1.600e-5566.00Ribosomal protein L19 n=26 Tax=Eukaryota TaxID=275... [more]
A0A484E6K8_BRELC4.420e-5565.33Ribosomal protein L19 n=1 Tax=Bremia lactucae TaxI... [more]
A0A7S2G695_9STRA8.570e-5564.94Ribosomal protein L19 n=2 Tax=Dictyocha speculum T... [more]
A0A3F2RJK4_9STRA1.240e-5468.06Ribosomal_L19e domain-containing protein n=1 Tax=P... [more]
A0A6U3PTD9_9STRA1.300e-5467.59Ribosomal protein L19 n=3 Tax=Stramenopiles TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..153
NoneNo IPR availableGENE3D1.10.1200.240coord: 34..162
e-value: 5.5E-50
score: 170.6
IPR000196Ribosomal protein L19/L19eSMARTSM01416Ribosomal_L19e_2coord: 14..123
e-value: 5.0E-44
score: 162.2
IPR000196Ribosomal protein L19/L19ePFAMPF01280Ribosomal_L19ecoord: 20..123
e-value: 2.4E-40
score: 137.9
IPR03954760S ribosomal protein L19PANTHERPTHR1072260S RIBOSOMAL PROTEIN L19coord: 9..165
IPR035970Ribosomal protein L19/L19e superfamilySUPERFAMILY48140Ribosomal protein L19 (L19e)coord: 20..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10352contigH-elongata_contig10352:6953..8865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10352.292.1mRNA_H-elongata_contig10352.292.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10352 6953..8865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10352.292.1 ID=prot_H-elongata_contig10352.292.1|Name=mRNA_H-elongata_contig10352.292.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
INPPTPTPISIRAAFRNGSQLVKDGLVIRLPAVVHSRARVNLRHEAKKKG
RHTGPGKRRGTANARLPFKLIWQRRMRILRRMLRKYREAKKIDKHLYHEL
YLGCKGNQFKNKRVLMEAIHKKKGEAARIKALKEQAEARKFKAKQRNERK
EDRKKVAAEARAQEASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000196Ribosomal_L19/L19e
IPR039547RPL19
IPR03597060S_ribosomal_L19/L19e_sf