prot_H-elongata_contig103454.287.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103454.287.1
Unique Nameprot_H-elongata_contig103454.287.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.660e-27
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    3 IVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            +VSYLPLSHIAAQILD+HGPM+LGC VAFAQPDALKGSLVKTLREI PTVFFGVPRV
Sbjct:  255 VVSYLPLSHIAAQILDMHGPMFLGCTVAFAQPDALKGSLVKTLREIRPTVFFGVPRV 311          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: F2UAC6_SALR5 (AMP dependent ligase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UAC6_SALR5)

HSP 1 Score: 93.2 bits (230), Expect = 9.740e-21
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            E IVSYLPLSHIAAQILD+H PM LG  V FAQP ALKG+LV+TL+E+ PTVF GVPRV
Sbjct:  246 EHIVSYLPLSHIAAQILDMHAPMILGATVWFAQPTALKGTLVQTLQEVRPTVFLGVPRV 304          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: K3WLR6_GLOUD (AMP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLR6_GLOUD)

HSP 1 Score: 92.8 bits (229), Expect = 1.330e-20
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            E  VS+LPLSH+AAQ+LDIH PM+LG  V+FA PDALKG+LV+TLREI PT FFGVPRV
Sbjct:  242 ERSVSFLPLSHVAAQLLDIHVPMFLGSQVSFAGPDALKGALVETLREIRPTFFFGVPRV 300          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A1Z5J6E1_FISSO (Long-chain-fatty-acid--CoA ligase ACSBG n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6E1_FISSO)

HSP 1 Score: 92.8 bits (229), Expect = 1.330e-20
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            + +VSYLPLSHIAAQ LD+  P++ GC V FAQPDALKG+LV TLRE+ PTVFFGVPRV
Sbjct:  257 DKLVSYLPLSHIAAQALDMFQPLFSGCKVYFAQPDALKGTLVDTLREVRPTVFFGVPRV 315          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A5D6Y4R7_9STRA (AMP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4R7_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.830e-20
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            E  VS+LPLSH+AAQ+LDIH PM+LG  V+FA PDALKG+LV+TLREI PT FFGVPRV
Sbjct:  967 ERSVSFLPLSHVAAQLLDIHVPMHLGSQVSFAGPDALKGALVETLREIRPTFFFGVPRV 1025          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A1X7TUX5_AMPQE (AMP-binding domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TUX5_AMPQE)

HSP 1 Score: 91.7 bits (226), Expect = 3.400e-20
Identity = 40/59 (67.80%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            E ++SYLPLSH+A Q+LDI+ P+ +G  V FAQPDALKGSL++TLRE+HPT+F GVPRV
Sbjct:  362 ERVISYLPLSHVATQLLDIYFPLAIGASVWFAQPDALKGSLLQTLREVHPTIFLGVPRV 420          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A7S2VCD9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCD9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.520e-20
Identity = 39/59 (66.10%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            ++++SYLPLSHIAAQ+LD+H P+  GC + FAQPDALKGS+  TL+E+ PT+FFGVPRV
Sbjct:   28 DAMISYLPLSHIAAQMLDLHTPLESGCQIYFAQPDALKGSIGTTLKEVRPTIFFGVPRV 86          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A7S2Y6D0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6D0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.330e-20
Identity = 39/59 (66.10%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            ++++SYLPLSHIAAQ+LD+H P+  GC + FAQPDALKGS+  TL+E+ PT+FFGVPRV
Sbjct:  255 DAMISYLPLSHIAAQMLDLHTPLESGCQIYFAQPDALKGSIGTTLKEVRPTIFFGVPRV 313          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A1S3HL33_LINUN (long-chain-fatty-acid--CoA ligase ACSBG2 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HL33_LINUN)

HSP 1 Score: 90.9 bits (224), Expect = 6.350e-20
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            E +VSYLPLSH+AAQI+DI+GP+  G  V FA+PDALKG+L  TL E+HPTVFFGVPRV
Sbjct:  424 EVLVSYLPLSHVAAQIVDIYGPLIAGAAVYFARPDALKGTLRITLNEVHPTVFFGVPRV 482          
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Match: A0A8K1FDL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDL6_PYTOL)

HSP 1 Score: 90.5 bits (223), Expect = 8.630e-20
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHPTVFFGVPRV 59
            E  VS+LPLSH+AAQ+LDIH PM+LGC + FA PDALKG+LV  L+EI PT FFGVPRV
Sbjct:  243 EKSVSFLPLSHVAAQLLDIHVPMHLGCEIYFAGPDALKGALVDILKEIRPTFFFGVPRV 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103454.287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWQ0_9PHAE5.660e-2791.23AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
F2UAC6_SALR59.740e-2176.27AMP dependent ligase n=1 Tax=Salpingoeca rosetta (... [more]
K3WLR6_GLOUD1.330e-2074.58AMP-binding domain-containing protein n=1 Tax=Glob... [more]
A0A1Z5J6E1_FISSO1.330e-2072.88Long-chain-fatty-acid--CoA ligase ACSBG n=2 Tax=Fi... [more]
A0A5D6Y4R7_9STRA1.830e-2074.58AMP-binding domain-containing protein n=1 Tax=Pyth... [more]
A0A1X7TUX5_AMPQE3.400e-2067.80AMP-binding domain-containing protein n=2 Tax=Amph... [more]
A0A7S2VCD9_9STRA4.520e-2066.10Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2Y6D0_9STRA6.330e-2066.10Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1S3HL33_LINUN6.350e-2071.19long-chain-fatty-acid--CoA ligase ACSBG2 isoform X... [more]
A0A8K1FDL6_PYTOL8.630e-2071.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 2..59
e-value: 1.3E-9
score: 37.2
IPR042099AMP-dependent synthetase-like superfamilyGENE3D3.40.50.12780coord: 1..59
e-value: 2.1E-6
score: 28.9
NoneNo IPR availablePANTHERPTHR43272FAMILY NOT NAMEDcoord: 2..59
NoneNo IPR availablePANTHERPTHR43272:SF32LONG-CHAIN-FATTY-ACID--COA LIGASE ACSBG2coord: 2..59
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 3..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103454contigH-elongata_contig103454:956..1759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103454.287.1mRNA_H-elongata_contig103454.287.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103454 956..1759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103454.287.1 ID=prot_H-elongata_contig103454.287.1|Name=mRNA_H-elongata_contig103454.287.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
ESIVSYLPLSHIAAQILDIHGPMYLGCLVAFAQPDALKGSLVKTLREIHP
TVFFGVPRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR042099AMP-dep_Synthh-like_sf