prot_H-elongata_contig103417.284.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig103417.284.1
Unique Name	prot_H-elongata_contig103417.284.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	114

Homology

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.840e-56
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0

Query:    2 RVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRYEPAAA 114
            R+GKRGAPQAFARKL EIL TES   I+WN +G+AF V DV+ FS + LTKYYRHSKFSSFQRQLNLYSFRKIVKG DAGGYAHPMF RDRPDDLYHVRRSISGS RYEPAAA
Sbjct:   33 RIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAA 145

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: D8LDA5_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA5_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 6.410e-51
Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0

Query:   10 QAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRYEPAAA 114
            +AFARKL EILTTES   I+WN +G+AF V DV+ FS + LTKYYRHSKFSSFQRQLNLYSFRKIVKG DAGGYAHPMF RDRPDDLYHVRRSISGS RYEPAAA
Sbjct:   12 EAFARKLAEILTTESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRSISGSARYEPAAA 116

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 143 bits (361), Expect = 6.510e-39
Identity = 71/114 (62.28%), Postives = 81/114 (71.05%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRYEPAAA 114
            PR G+RGAPQAFARKLYEIL  E   +++WN  G AF VRD+D FS E L KY+RHSKF+SFQRQLNLY FRKI +G DAG YAH  F + +PD L  VRRS S S    P  A
Sbjct:    4 PRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSSPSPPHPA 117

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.030e-36
Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRY 109
            PR G+RGAPQ F RKLYEIL+TE + +I W + G +F ++++++F    L KY+RH K+SSFQRQLNLY FRK+ KG D G YAH  F RD+P+ L  VRR    +G +
Sbjct:    4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGAF 112

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.780e-36
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRYE 110
            PR G+RGAPQ F RKLYEILT ES  +I+W E+GT+F ++++D F  E L KY+RH K+SSFQRQLNLY FRKI KGPD G YAH  F RD    L  VRR    +GR +
Sbjct:   74 PRTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRRWAQSAGRQQ 183

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A6V2VRS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRS5_HETAK)

HSP 1 Score: 135 bits (339), Expect = 8.390e-36
Identity = 64/109 (58.72%), Postives = 77/109 (70.64%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRY 109
            PR G RGAPQ FARKLY+IL TES+ VI WNE GTAF ++D+D FS E L KY+RH+ +SSFQRQ+NLY F+KI +GP AG   H  F R RPD L  V+R    S  +
Sbjct:   11 PRTGSRGAPQVFARKLYQILLTESKDVICWNEPGTAFFIKDMDRFSQEVLMKYFRHNNYSSFQRQMNLYGFKKISRGPFAGANMHQQFLRGRPDLLVMVKRKPRSSSPF 119

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 8.290e-35
Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRR 101
            PR G+RGAPQ F RKLYEILT E   VI W   G +F + +++ F  E L  Y+RH K+SSFQRQLNLY FRKI KGPD G YAH  F RD+P+ L  VRR
Sbjct:   96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.560e-34
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGR 108
            PR GKRGAPQ F RKLYEIL  ES+  I+W E G +F ++D+++F    L KY+RH KFSSFQRQLNLY FRKI KG + G Y H  F RD+ D L  VRR+   +GR
Sbjct:   66 PRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQVTGR 173

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 5.760e-34
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRS 102
            PR GKRGAPQAFA KLYEIL  ES  VIAW+  G AF ++D+D F  + L KY+RH K+SSFQRQLNLY FRK  KG D GGY H  F R R D L  VRR+
Sbjct:   74 PRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRT 175

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BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Match: A0A7S2WU52_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU52_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.530e-33
Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 0

Query:    1 PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETLTKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVRRSISGSGRYEPAAA 114
            PR GKRGAPQ FARKLYEIL  E    I+W   GT+F ++++D+F    L KY+RH K+SSFQRQLNLY FRKI KG DAG YAH  F R +P+ L+ VRR    S    P  A
Sbjct:  158 PRTGKRGAPQVFARKLYEILDNEPPDAISWTTSGTSFVIKEMDAFVTCVLMKYFRHQKYSSFQRQLNLYGFRKISKGSDAGAYAHESFIRGQPELLHFVRRMPQSSSSPVPPVA 271

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot

BLAST of mRNA_H-elongata_contig103417.284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KMN3_9PHAE	1.840e-56	82.30	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
D8LDA5_ECTSI	6.410e-51	81.90	Putative Heat Shock transcription factor n=1 Tax=E...	[more]
A0A6V1QFS1_HETAK	6.510e-39	62.28	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2BSE7_9STRA	1.030e-36	53.21	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7S2CXJ7_9STRA	3.780e-36	59.09	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A6V2VRS5_HETAK	8.390e-36	58.72	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2G7U9_9STRA	8.290e-35	59.41	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2R5C8_9STRA	3.560e-34	57.41	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2WKC6_9STRA	5.760e-34	62.75	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2WU52_9STRA	1.530e-33	56.14	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 11..34 score: 14.76 coord: 49..61 score: 43.74 coord: 62..74 score: 68.79
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 8..102 e-value: 1.6E-19 score: 80.9
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 12..101 e-value: 1.4E-24 score: 86.5
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 5..104 e-value: 1.8E-27 score: 97.6
None	No IPR available	PANTHER	PTHR10015:SF206	HEAT SHOCK FACTOR PROTEIN	coord: 12..101
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 12..101
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 9..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig103417	contig	H-elongata_contig103417:687..1028 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig103417.284.1	mRNA_H-elongata_contig103417.284.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig103417 687..1028 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig103417.284.1 ID=prot_H-elongata_contig103417.284.1|Name=mRNA_H-elongata_contig103417.284.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
PRVGKRGAPQAFARKLYEILTTESQGVIAWNEDGTAFHVRDVDSFSVETL
TKYYRHSKFSSFQRQLNLYSFRKIVKGPDAGGYAHPMFHRDRPDDLYHVR
RSISGSGRYEPAAA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf