prot_H-elongata_contig103344.276.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103344.276.1
Unique Nameprot_H-elongata_contig103344.276.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length213
Homology
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 2.420e-104
Identity = 169/208 (81.25%), Postives = 188/208 (90.38%), Query Frame = 0
Query:    7 QLLDIKDWTDALKGGLPPVKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKWDPKRTRLMAATTALIQRTDRADFT-EAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMPEAAGK 213
            ++LDIKDWTDALKGGLPPVKLPK+VFGTAGCYSFMEEKLRP LEYEDLKAGVFQDFRE GNALAFL+CLSEA+AG+DCLKFV TVP+MGL SSKKWDPKRTRL+AATTALI+    ADFT EA ASL GLE AVLEGQ ACKGL+T ASIFRHTLGEL  ALD+L LR+ WAG +P+NGV+DVE+S++FSRLFSALNFLFCMPEA G+
Sbjct: 1023 KMLDIKDWTDALKGGLPPVKLPKYVFGTAGCYSFMEEKLRPFLEYEDLKAGVFQDFREFGNALAFLQCLSEASAGLDCLKFVQTVPVMGLSSSKKWDPKRTRLVAATTALIR---GADFTGEAGASLSGLEDAVLEGQAACKGLSTSASIFRHTLGELSTALDVLRLREAWAGAQPANGVLDVEESVSFSRLFSALNFLFCMPEAKGE 1227          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 2.260e-101
Identity = 165/208 (79.33%), Postives = 183/208 (87.98%), Query Frame = 0
Query:    7 QLLDIKDWTDALKGGLPPVKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKWDPKRTRLMAATTALIQRTDRADFT-EAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMPEAAGK 213
            ++LDIKDWTDALKGGLPPVKLPK+VFGTAGCYSFMEEKLRP LEYEDLKAGVFQDFRE GNALAFL+CLSEA+AG+DCLKFV TVP+MGL SSKKWDPKRTRL+AATTAL++    AD T EA ASL GLE AVLEGQ ACK L T ASIFRHTLGEL  ALD+L LR+ W G +P NGV+DVE+S++FSRLFSALNFLFCMPEA G+
Sbjct:  729 KMLDIKDWTDALKGGLPPVKLPKYVFGTAGCYSFMEEKLRPFLEYEDLKAGVFQDFREFGNALAFLQCLSEASAGLDCLKFVQTVPVMGLSSSKKWDPKRTRLVAATTALVR---GADLTGEAGASLSGLEDAVLEGQAACKDLATSASIFRHTLGELSTALDVLRLREAWVGAQPVNGVLDVEESVSFSRLFSALNFLFCMPEAKGE 933          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A7S1UBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBW1_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.750e-38
Identity = 91/218 (41.74%), Postives = 117/218 (53.67%), Query Frame = 0
Query:    4 NLFQLLD-IKDWTDALKGGLPPVKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKWDPKRTRLMAATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRA-----------SIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMPE 209
            NL  LLD IK + DALK GLPP KLPKFV+G A CY F E KL+P LEYED+K  VFQ  RE+GN +AFL+ LSE     + LKFV     +G+   ++          AT  +        F +A  S+V     V    E   G   RA           S+F+ T+  ++  LD   +R  W    P+NGVM+VE S  F RL+SALNFL+C+ E
Sbjct:  377 NLDHLLDSIKSYMDALKDGLPPCKLPKFVYGVAACYGFFEGKLKPFLEYEDMKPEVFQTLREIGNTVAFLKDLSEVIEATEGLKFVQAASFLGVSPEEQSFRSGAE---ATPYMRTMVGFCGFAQANPSVVKAPLVV----ETMLGSARRAVGMHEYLGRSRSLFKATMRAVNDMLDQKGMRQAWTNSSPANGVMEVEASNEFHRLWSALNFLYCISE 587          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A835YVZ9_9STRA (Cytoplasmic fragile-X interacting family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.070e-37
Identity = 87/216 (40.28%), Postives = 121/216 (56.02%), Query Frame = 0
Query:    1 MRFNLFQLLDIKDWTDALKGGLPPVKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKWDPKRTRLMAA----TTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMA----FSRLFSALNFLFCMP 208
            M++   +L D+ +W  AL  GLP + LP    G AG Y+  E +L+P+LEY DL+ GVFQD RE+GNALAFL  L +     DCL FVH +PI+G+P+S+ W+  RTRLM A    T A+      +   ++ A+L    +A   GQEA        S+F   L  LD A+    +R+ W G  P +G+ +  D       F RL+SAL+F FC P
Sbjct: 1077 MQYLESKLDDLLEWARALTPGLPSLALPSLSMGLAGAYAMFEVQLQPLLEYPDLRNGVFQDLREMGNALAFLFSLGKLMQVDDCLTFVHALPIIGVPTSRTWEGDRTRLMTAIGGITAAITGSGCPSGVAQSAATLTDSAKA---GQEAAAACALPQSLFGTALQRLDVAISASGIREEWQGG-PLDGLCEPADGAPPPPHFYRLWSALHFAFCQP 1288          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: F0YL26_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL26_AURAN)

HSP 1 Score: 105 bits (262), Expect = 1.350e-22
Identity = 72/207 (34.78%), Postives = 106/207 (51.21%), Query Frame = 0
Query:    4 NLFQLLDI-KDWTDALKGGLPPVKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKWDPKRTRLM----AATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLF 205
            NL + L+I K + DA+  GLPP KLPK ++G AGCY   +  L+PIL Y DLK  VFQ F+E+GNAL F+  +S+    +D  + +H    + L  S K  P  + L     + T A+ +   R          + +    ++G    +    R ++F   L  L   +     R  W    PSNGV+D+E + +F RL+SAL FLF
Sbjct:  925 NLQERLEISKAYLDAITKGLPPCKLPKAMYGLAGCYGVFDALLKPILAYVDLKPEVFQAFKEVGNALFFIRDMSDVLDCIDLARGLHQFSWIPLADSYKPVPALSHLAIECHSLTCAMPEEQMRCVIPRGAVPELAVIAERIQGDMLSEA-DQRITLFWGALTHLSLLIQPF--RPGWTELLPSNGVLDLEATGSFHRLWSALGFLF 1128          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: D3BK91_POLPP (Component of SCAR regulatory complex n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BK91_POLPP)

HSP 1 Score: 100 bits (248), Expect = 9.980e-21
Identity = 65/205 (31.71%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   16 DALKGGLPPV-KLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGL-PSSKKWDPKR----------TRLMAATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMP 208
            + ++ G+PP  KLP + +GT G Y + + KL+ I  Y DL+  V Q FRELGN++ F+  L +A    D L F  + P +G  P S   DP            ++L      + Q+ D     E    +VG         +  +      S+F+  L  +   L+  N+R  W+G  P NGV++V+ S  F RL+SAL F+ C P
Sbjct:  936 ELIQSGMPPSQKLPIYDYGTEGGYGYFQLKLKDIYTYPDLRPEVIQCFRELGNSIVFMNLLDQALVQSDALIFTKSAPFLGFTPESWYQDPTGEDPTLQSPLYSQLQKLAQLIEQKPDVTKVPEYFNEIVG---NAWRADKFYRPADNNTSLFKSVLQRISQILN--NVRSEWSGTAPDNGVINVDSSTEFYRLWSALQFVTCWP 1135          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A151ZAX9_9MYCE (Component of SCAR regulatory complex n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAX9_9MYCE)

HSP 1 Score: 99.4 bits (246), Expect = 1.840e-20
Identity = 71/205 (34.63%), Postives = 101/205 (49.27%), Query Frame = 0
Query:   16 DALKGGLPP-VKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKW----DPKRTRLMAATTALIQRTDRADFTEAE----ASLVGLERAVLEGQEACKGLTTR---ASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMP 208
            + L  G+PP  KLP + +GT G Y + + KLR I  Y DL+  V Q FRELGN L  +  L +A   VD   FV + P +G+ + + W    + +   L +   A IQ+   A F E+      S   L   V     A K        +S+F+  L      L+++  R  WAG  P NGV+ ++ S  FSRL+SAL F+ C P
Sbjct:  939 ELLANGMPPSTKLPIYDYGTEGGYGYFQLKLRDIYIYPDLRPEVLQCFRELGNTLILMNLLDQAVVQVDSFNFVKSAPFLGI-TPESWFQDQNGEDPTLQSPLYAQIQKL--AQFLESNPQGSTSNQVLNDIVANAWRADKFYRPNELNSSLFKSVLQRFSQLLNVV--RGEWAGQAPDNGVICIDSSTEFSRLWSALQFVICWP 1138          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A0D2WGK4_CAPO3 (Cytoplasmic FMR1-interacting protein 1 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WGK4_CAPO3)

HSP 1 Score: 99.0 bits (245), Expect = 2.500e-20
Identity = 64/198 (32.32%), Postives = 96/198 (48.48%), Query Frame = 0
Query:   14 WTDALKGGLP-PVKLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSKKWDPKRTRLMAATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMPEA 210
            + ++   G+P  +K P F +GT G + + +  L+PIL Y DLK  VF  FRELGN+L F   L ++    D   +V ++P   +  S    P  T  +  T      T          SL G  RA    +     L  R S+F   L   DA L    +R+ W G RP+NG+++++++  F RL+S L F +C P A
Sbjct:  944 YVESFMRGIPVDMKTPLFQYGTLGTFQYFQAHLKPILAYRDLKTEVFHVFRELGNSLIFARLLDQSMLQRDLFTYVQSLPFYTIDRSGVTVPSTTGQVDPTAFFKFVTTHLQGQPFSESLGG--RAEQASKLNAPSLA-RKSLFVRVLERFDALL--APVREKWRGSRPTNGILNIDETSEFYRLWSVLQFAYCTPGA 1136          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A8J9XX57_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9XX57_BRAAE)

HSP 1 Score: 97.4 bits (241), Expect = 8.530e-20
Identity = 60/206 (29.13%), Postives = 102/206 (49.51%), Query Frame = 0
Query:   10 DIKDWTDALKGGLPPV-KLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGL------PSSKKWDPKRTRLMAATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMP 208
            ++  +T  L   +P + KLP++ +G+ G  +F   +L  IL+Y D K  +F +FRE GN + F   + +A +  +    +   P   +         +K + K+ RL A   AL    +      A+ +++  E  +L  +  C GL    SIF   L  L + LD       W G  P+NGVM++++ + F RL+SAL F++C+P
Sbjct:  966 NLLQFTKTLMSAMPKICKLPRYDYGSPGVLAFYHAQLNDILQYPDAKTELFHNFREFGNTIIFCLLMEQALSQEEVCDLLQAAPFQNILPRPYCKEGEKLEVKQKRLEAKYAALQIVPNIEKLGTAKQAMISKEGDLLTRERLCCGL----SIFEVVLNRLKSFLD----DPVWVGPPPANGVMNIDECVEFHRLWSALQFVYCVP 1163          
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Match: A0A7G3AFU7_LUTLO (Putative cytoplasmic fmr1-interacting protein n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A7G3AFU7_LUTLO)

HSP 1 Score: 97.1 bits (240), Expect = 1.120e-19
Identity = 61/208 (29.33%), Postives = 105/208 (50.48%), Query Frame = 0
Query:   10 DIKDWTDALKGGLPPV-KLPKFVFGTAGCYSFMEEKLRPILEYEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGL------PSSKKWDPKRTRLMAATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLTTRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSALNFLFCMPEA 210
            ++  +T  L   +P   KLP+F +G+ G  S+    L  I++Y D K  +FQ FRE GN++ F   + +A +  +    +H  P   +         +K + K+ RL +  ++L   ++   F  A+ +++  E  +L  +  C GL    SIF   LG + + +D       W G  P NGVM++++   F RL+SAL F++C+P A
Sbjct:  705 NLLQFTKTLMSAMPKTCKLPRFDYGSPGVLSYYHAHLIDIVQYPDAKTELFQLFREFGNSIIFCLLIEQALSQEEVCDLLHAAPFQNILPRPYCKDGEKPETKQKRLESKYSSLQIVSNVEKFGTAKQAMIAREGDLLTRERLCCGL----SIFEVILGRVKSYMD----DPVWMGPPPINGVMNIDECSEFHRLWSALQFVYCIPVA 904          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103344.276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y8_ECTSI2.420e-10481.25UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQX8_9PHAE2.260e-10179.33UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S1UBW1_9STRA3.750e-3841.74Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YVZ9_9STRA1.070e-3740.28Cytoplasmic fragile-X interacting family-domain-co... [more]
F0YL26_AURAN1.350e-2234.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
D3BK91_POLPP9.980e-2131.71Component of SCAR regulatory complex n=1 Tax=Polys... [more]
A0A151ZAX9_9MYCE1.840e-2034.63Component of SCAR regulatory complex n=1 Tax=Tiegh... [more]
A0A0D2WGK4_CAPO32.500e-2032.32Cytoplasmic FMR1-interacting protein 1 n=1 Tax=Cap... [more]
A0A8J9XX57_BRAAE8.530e-2029.13Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A7G3AFU7_LUTLO1.120e-1929.33Putative cytoplasmic fmr1-interacting protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008081Cytoplasmic FMR1-interactingPFAMPF05994FragX_IPcoord: 14..210
e-value: 3.6E-30
score: 104.7
IPR008081Cytoplasmic FMR1-interactingPIRSFPIRSF008153CYFIPcoord: 4..213
e-value: 2.6E-28
score: 96.2
IPR008081Cytoplasmic FMR1-interactingPANTHERPTHR12195P53 INDUCIBLE PROTEIN-RELATEDcoord: 24..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103344contigH-elongata_contig103344:304..2063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103344.276.1mRNA_H-elongata_contig103344.276.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103344 304..2063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103344.276.1 ID=prot_H-elongata_contig103344.276.1|Name=mRNA_H-elongata_contig103344.276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp
MRFNLFQLLDIKDWTDALKGGLPPVKLPKFVFGTAGCYSFMEEKLRPILE
YEDLKAGVFQDFRELGNALAFLECLSEAAAGVDCLKFVHTVPIMGLPSSK
KWDPKRTRLMAATTALIQRTDRADFTEAEASLVGLERAVLEGQEACKGLT
TRASIFRHTLGELDAALDMLNLRDTWAGDRPSNGVMDVEDSMAFSRLFSA
LNFLFCMPEAAGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008081Cytoplasmic_FMR1-int