prot_H-elongata_contig103108.262.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103108.262.1
Unique Nameprot_H-elongata_contig103108.262.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length261
Homology
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 5.370e-74
Identity = 134/225 (59.56%), Postives = 150/225 (66.67%), Query Frame = 0
Query:   45 LPGKLCLVSGGGAGFTAGMAGGSTVGSDEPAGFGLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDA--------------QQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPEGPK 255
            L GK   V+GGGAG  A        G  EPAGFG+ SAWGV+SV+FILMNA+KRLAPIA QPFSR                                 GFQ+KFSPLVVKRALTLD               ++R GPLRLLLAGPYSMGLFHA+KKR+TVSW LT GV+ LVQ+VKRLPYPWRSIVDAGVVVGLSYG LSICVIWARA++GK P +DPA+PE  K
Sbjct:  124 LMGKALFVTGGGAGAGA-------AGKGEPAGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRAS------------------------------LGFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEKK 311          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A6H5KSH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH0_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 2.150e-64
Identity = 104/140 (74.29%), Postives = 113/140 (80.71%), Query Frame = 0
Query:  127 MYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQ--------------RPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPE 252
            MY  FSA+MAYAEG KGFQQKFSPLVVKRALTLD                 R GPLRLLLAGPYSMGLFHA+KKR+TVSW LT GV+ LVQ+VKRLPYPWRSIVDAGVVVGLSYG LSICVIWARAV+G+ P +DPA+PE
Sbjct:    1 MYAGFSAIMAYAEGFKGFQQKFSPLVVKRALTLDPAAXXXXXXXXXXXXXXRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAVLGRAPSIDPALPE 140          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA)

HSP 1 Score: 207 bits (527), Expect = 6.000e-63
Identity = 109/175 (62.29%), Postives = 128/175 (73.14%), Query Frame = 0
Query:   77 FGLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMP 251
            FGL SAWGVLSVL IL NA+KRLAPIA QPF          GD    HW MYV F+ LMAYAEG K FQ+KFSP+VV+RALTLD  +  GPLRL+LAGPYSMGLFHAS+KR+ VSW L+  V+ LVQ V++LPYPWRSI+D GVV GLS+G+ +I   W R+  G  P VD  +P
Sbjct:   96 FGLASAWGVLSVLAILGNAVKRLAPIAMQPFK--------SGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLD--KSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLP 260          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.530e-61
Identity = 104/177 (58.76%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   77 FGLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLD-AQQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPE 252
            FG  SAWGVLSVL IL  A++RL PIA QPF          GD    HW +Y++F ALMAY EG K FQ+KFSP+VV+RALTLD A+   GPLR++LAGPY MGLF+A++KR+ VSW L   VI LV +V++LPYPWRSI+DAGVV GLS+GA +I   W R+  G+ P VD  MPE
Sbjct:   47 FGFASAWGVLSVLSILAGALRRLVPIALQPFKA--------GDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQARTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPE 215          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA)

HSP 1 Score: 189 bits (481), Expect = 9.350e-56
Identity = 108/205 (52.68%), Postives = 136/205 (66.34%), Query Frame = 0
Query:   48 KLCLVSGGGAGFTAGMAGGSTVGSDEPAGFGLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPE 252
            KL  ++GG A           V + +   F L + WGV+ V+ +L NAI+RL PIA +PF +      +   F  +HW  YV F+ +MAYAEG KGFQ KFSPLVVKRALTL    R   L  +LA PYSMGLFHASKKR+ VSW +  GVI LV+ VK L +P+RSIVDAGVV GLS+GALSI  I+A+A+ G VP +DPA+P+
Sbjct:   96 KLAKITGGAA---------PAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTA----TPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGP--RSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPD 285          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 9.260e-54
Identity = 105/203 (51.72%), Postives = 127/203 (62.56%), Query Frame = 0
Query:   61 AGMAGGSTVGSDE--PAGFGLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQRPGP---LRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVM-GKVPLVDPAMP-EGPKG 256
            A ++GG  +  DE  P GF + S WG L V++IL N IKRL P+A QPF+       S GD   +HWV Y  +   M Y EG K FQ KF PLVV RA TL+ Q   GP   LR  LA  YSMGLFHASKKR  VSW    G+  +V  VKRLPYPWRSI+D GVV GLS+GA SI  ++ R +  G++P VDP +P + PKG
Sbjct:  106 AAISGGGKLSKDEQSPLGF-IASTWGALGVMYILANPIKRLLPVALQPFA-------SPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLERQDCRGPGWWLRAALAPLYSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLPVKEPKG 300          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU)

HSP 1 Score: 177 bits (449), Expect = 1.530e-51
Identity = 99/179 (55.31%), Postives = 117/179 (65.36%), Query Frame = 0
Query:   78 GLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQRPGPL-RLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPEGPK 255
            GLR+AWGV   L IL  AI RLAPIA QP          Q D   + W +Y    A  AY EG K FQ KFSPLVV+RA+TL  +  P PL   +LA  YSMGLFHASKKR+TVSW ++ GV  ++ LVKRLPYPWRS+VDAGV  GL +G  SI VI+ RA+ GK P VDP +P+  K
Sbjct:   72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPIL--------QRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 242          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA)

HSP 1 Score: 170 bits (430), Expect = 5.900e-49
Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 0
Query:   78 GLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPE 252
            G+  AWGV   L IL +AIKRLAPIA QPF         Q D   + W  Y     + AY EG   FQ+KFSPLVV+RA+TL  +Q   P+ + LA  YSMGL HA+KKR+ VSW ++  V ++V +VKRLPYPWRSIVDAGV  GL++GA+SI +I+ARA+ G  P VDP +P 
Sbjct:   55 GIAVAWGVCGFLGILASAIKRLAPIAMQPFL--------QRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTL--KQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLPS 219          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A836CMT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.820e-48
Identity = 92/209 (44.02%), Postives = 129/209 (61.72%), Query Frame = 0
Query:   44 CLPGKLCLVSGGGAGFTAGMAGGSTVGSDEPAGFGLRSAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMPE 252
            C+  K+ L+SGGGA          T  + +    G  S+WGVLSVL I  NA +RL P+A +P          +G   TV WV Y   +AL+ Y +G +  ++KFS  VV+RALTLD Q    PLR+LLAGPYSMGLF A+++R+  SWG+    + +++++K++PYPWRSIVDAGV+ GL +G  ++   W R+  G  P VDP MP+
Sbjct:   59 CIFNKIALLSGGGAASV------DTPMNSKAVKIGWASSWGVLSVLAIFANAARRLGPVAIEPLQMS-----DKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLD-QGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPK 255          
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT)

HSP 1 Score: 163 bits (413), Expect = 1.930e-46
Identity = 90/172 (52.33%), Postives = 111/172 (64.53%), Query Frame = 0
Query:   81 SAWGVLSVLFILMNAIKRLAPIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSPLVVKRALTLDAQQ-RPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVILLVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAMP 251
            S WGV+ V+ IL NAI RLAPIA +PF          G    +HW  Y    A  AY EG K FQ KFSPLVV RA TL  Q  R   LR +LA  YSMGLFHA++KR+ +SW ++  VI++V +VKRLPYPWRSIVDAGVV GL++G  SI  I+ +A+ G +P V   +P
Sbjct:   53 SHWGVVGVMAILANAIGRLAPIAAEPFR--------YGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGGRATALRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103108.262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY0_ECTSI5.370e-7459.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSH0_9PHAE2.150e-6474.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CIU2_9STRA6.000e-6362.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF77_9STRA4.530e-6158.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TVP9_9STRA9.350e-5652.68Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2WJT5_9STRA9.260e-5451.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3SW48_EMIHU1.530e-5155.31Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A0M0JX49_9EUKA5.900e-4952.57Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A836CMT5_9STRA2.820e-4844.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6CDI7_DIALT1.930e-4652.33Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 101..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..80
NoneNo IPR availableTMHMMTMhelixcoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 122..141
NoneNo IPR availableTMHMMTMhelixcoord: 188..205
NoneNo IPR availableTMHMMTMhelixcoord: 215..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103108contigH-elongata_contig103108:548..1969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103108.262.1mRNA_H-elongata_contig103108.262.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103108 548..1969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103108.262.1 ID=prot_H-elongata_contig103108.262.1|Name=mRNA_H-elongata_contig103108.262.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
VRLGRCTQRSTCSSRPVASAFGALELQSATTLGGGVTTGSSSPCLPGKLC
LVSGGGAGFTAGMAGGSTVGSDEPAGFGLRSAWGVLSVLFILMNAIKRLA
PIAFQPFSRKKHFFFSQGDFKTVHWVMYVTFSALMAYAEGLKGFQQKFSP
LVVKRALTLDAQQRPGPLRLLLAGPYSMGLFHASKKRRTVSWGLTTGVIL
LVQLVKRLPYPWRSIVDAGVVVGLSYGALSICVIWARAVMGKVPLVDPAM
PEGPKGPAVA*
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