prot_H-elongata_contig103102.261.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103102.261.1
Unique Nameprot_H-elongata_contig103102.261.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: D8LKA1_ECTSI (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA1_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.730e-57
Identity = 110/149 (73.83%), Postives = 115/149 (77.18%), Query Frame = 0
Query:    1 AANQERGKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKYKAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVASRAMAKTPA 149
            AAN E G K  AHVVPDAG +FAVRVHDFRLYH+VCRDVI RWMYPLVPDNA+TGGVQTQYTY R C YKAPGVNLPRSVRLGNGVVIGADVTVGEN VIERSVI    XXXXXXX                 +EG +VASRAM KTPA
Sbjct:  153 AANHELGNKILAHVVPDAGASFAVRVHDFRLYHEVCRDVILRWMYPLVPDNATTGGVQTQYTYSRVCNYKAPGVNLPRSVRLGNGVVIGADVTVGENTVIERSVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGAIVASRAMTKTPA 301          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: A0A835YX04_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX04_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 7.610e-21
Identity = 67/138 (48.55%), Postives = 77/138 (55.80%), Query Frame = 0
Query:    2 ANQERGKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPDNA--STGGVQTQYTY----------ERGCKYKAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAE 127
            AN E G K  AH+V      ++ RV D RLYH V RD+I RW YPLVPDNA  ST                   +RG  Y+  GV LPRSV +G G VIG DV VGE AV+         XXXXXXX+ DSY+W GAE
Sbjct:  254 ANVELGNKIMAHIV--GPREYSARVEDLRLYHAVSRDIIRRWTYPLVPDNAVSSTSXXXXXXXXXXXSACALRAQRGYVYRHRGVTLPRSVSVGAGTVIGPDVAVGEGAVLSGCXXXXXXXXXXXXXVTDSYVWEGAE 389          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: A0A0D7BDJ9_9AGAR (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BDJ9_9AGAR)

HSP 1 Score: 89.4 bits (220), Expect = 6.890e-18
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0
Query:   22 FAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKY--KAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVASRAMAK 146
            +A RV D R Y  V +D+++RW +PLVPDN   G   T Y + RG KY  K   V L R+ ++GN  +IG    + E+  I  SVIG  C       IVDSYL+ G  +G    IE +++  R + K
Sbjct:  273 YAARVKDTRSYESVSKDILSRWTFPLVPDNNYPGS--TSYEHIRGNKYIAKDSSVTLGRTSKVGNNTLIGPSTNISEDVHITSSVIGQDCIIGAGSVIVDSYLFDGVVVGPECVIEKSIIGERVVIK 397          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: UPI001B87B174 (nucleotide-diphospho-sugar transferase n=1 Tax=Suillus paluster TaxID=48578 RepID=UPI001B87B174)

HSP 1 Score: 87.0 bits (214), Expect = 4.470e-17
Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 0
Query:   22 FAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKY--KAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVASRAMAK 146
            +A RV D R Y  V +D+++RW +PLVPD+   GG    Y + RG KY  K   V L R+ ++GN  +IG+   + +NA +  SV+G GC       + +SYL+ GA IG    +E +++ S    K
Sbjct:  277 YAARVRDTRSYDSVSKDILSRWTFPLVPDDNHPGG--HSYEHLRGNKYIAKDNSVTLSRTCKIGNNTLIGSKSQIADNAQVTASVLGQGCTVGAGSIVRNSYLFDGAIIGPNCVVEHSIIGSGVQIK 401          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: A0A6A6QTR6_9PEZI (Mannose-1-phosphate guanyltransferase n=1 Tax=Lophium mytilinum TaxID=390894 RepID=A0A6A6QTR6_9PEZI)

HSP 1 Score: 87.0 bits (214), Expect = 4.690e-17
Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 0
Query:    7 GKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKYKAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVAS 141
            GK    H+V D    +A RV +   Y  +C+D+++RW YPL PD+    G    Y  ++G  YK  GV L RS  +    VIG D +VGE  VI  S+     XXXXX  I  +Y+W    IGD +++E  ++AS
Sbjct:  856 GKTIHTHIVTDH---YAARVRNLHAYDSICKDIVSRWAYPLCPDSNLLRG--QSYRLQKGNIYKEQGVILARSCHINRKTVIGRDTSVGEGTVISNSIXXXXXXXXXXVSIEGAYIWDNTRIGDSSTVERAILAS 985          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: A0A4V6TNL6_WALIC (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Wallemia ichthyophaga TaxID=245174 RepID=A0A4V6TNL6_WALIC)

HSP 1 Score: 85.9 bits (211), Expect = 1.160e-16
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 0
Query:    7 GKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKYKAP-GVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVA 140
            GK    H + D    +A RV D R Y  + +D+I+RW YP+VPD    G    +  + RG +Y    GVN+  S R+G   V+G+  TV  ++ ++RSV+G G        +  SY+W    IG G SI  ++VA
Sbjct:  557 GKTIHVHAIEDEEGGYAARVMDSRSYDAISQDIISRWTYPMVPDECMPGS--DRLLHHRGHRYYGKQGVNVAESARVGVCSVLGSHCTVAAHSTLDRSVLGQGVAVGENTQLSHSYIWNKTSIGSGCSIYQSIVA 689          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: A0A1Y2J8Z8_PYCCO (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2J8Z8_PYCCO)

HSP 1 Score: 84.7 bits (208), Expect = 2.880e-16
Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 0
Query:   22 FAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKY--KAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVASR 142
            +A RV D R Y  V +D+++RW +PLVPD+   GG    Y + RG KY  K   V L R+ ++GN  +IG+  T+  NA +  SVIG  C       + ++Y++    IG G  +EG++V +R
Sbjct:  275 YAARVADTRSYDSVSKDILSRWTFPLVPDDNHPGG--HAYEHLRGNKYIAKDNSVVLSRTCKVGNNTLIGSHTTIEANATVHASVIGQRCTIGPGAVLRNAYIFDDTHIGAGCVVEGSIVGAR 395          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: R9AFZ1_WALI9 (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Wallemia ichthyophaga (strain EXF-994 / CBS 113033) TaxID=1299270 RepID=R9AFZ1_WALI9)

HSP 1 Score: 84.0 bits (206), Expect = 5.240e-16
Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 0
Query:    7 GKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKYKAP-GVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVVA 140
            GK    H + D    +A RV D R Y  + +D+I+RW YP+VPD    G    +  + RG +Y    GV++  S R+G   V+G+  TV  ++ ++RSV+G G        +  SY+W    IG G SI  ++VA
Sbjct:  262 GKTIHVHAIEDEEGGYAARVMDSRSYDAISQDIISRWTYPMVPDECMPGS--DRLLHHRGHRYYGKQGVDVAESARVGVCSVLGSHCTVAAHSTLDRSVLGQGVAVGENTQLSHSYIWNKTSIGSGCSIYQSIVA 394          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: A0A2R5GM02_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GM02_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.260e-16
Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    3 NQERGKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKYKAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGC 109
            N E G +  AH +    + +A RV  FR Y  + RDV+ RW+YPLVPD A+    +T Y  ERG +Y+  GV + RS  +G   VIGA   + E A I  SV+GD C
Sbjct:  266 NHELGYRIHAHELTSQ-SDYACRVRCFRTYDAISRDVVRRWLYPLVPD-ANWASEETAYALERGLRYRDEGVRVGRSSVIGQSCVIGAGSEIDEGATITTSVLGDHC 370          
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Match: UPI002007E904 (nucleotide-diphospho-sugar transferase n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI002007E904)

HSP 1 Score: 83.6 bits (205), Expect = 7.280e-16
Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 0
Query:   22 FAVRVHDFRLYHQVCRDVITRWMYPLVPDNASTGGVQTQYTYERGCKY--KAPGVNLPRSVRLGNGVVIGADVTVGENAVIERSVIGDGCXXXXXXXIVDSYLWAGAEIGDGASIEGTVV 139
            +A RV D R Y  V +D+++RW +PLVPD+   GG    Y + RG KY  K   V L R+ ++GN  +IGA  TV  +A +  SV+G  C       + D+Y++    +G G  +EG++V
Sbjct:  275 YAARVADTRSYDAVSKDILSRWTFPLVPDDNHPGG--HLYEHLRGNKYIAKDNSVTLSRTCKVGNNTLIGAGSTVAAHATVHASVVGQRCTIGPGAVLRDAYVFDDTHVGAGCVVEGSIV 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103102.261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKA1_ECTSI1.730e-5773.83eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A835YX04_9STRA7.610e-2148.55eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A0D7BDJ9_9AGAR6.890e-1839.37eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
UPI001B87B1744.470e-1737.01nucleotide-diphospho-sugar transferase n=1 Tax=Sui... [more]
A0A6A6QTR6_9PEZI4.690e-1738.52Mannose-1-phosphate guanyltransferase n=1 Tax=Loph... [more]
A0A4V6TNL6_WALIC1.160e-1635.56eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A1Y2J8Z8_PYCCO2.880e-1637.40eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
R9AFZ1_WALI95.240e-1634.81eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A2R5GM02_9STRA7.260e-1642.99eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
UPI002007E9047.280e-1637.50nucleotide-diphospho-sugar transferase n=1 Tax=Epi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 48..146
e-value: 1.0E-13
score: 52.8
NoneNo IPR availablePANTHERPTHR45887FAMILY NOT NAMEDcoord: 7..146
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 103..139
e-value: 3.8E-4
score: 20.1
coord: 80..102
e-value: 1.3E-5
score: 24.7
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 22..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103102contigH-elongata_contig103102:712..2320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103102.261.1mRNA_H-elongata_contig103102.261.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103102 712..2320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103102.261.1 ID=prot_H-elongata_contig103102.261.1|Name=mRNA_H-elongata_contig103102.261.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
AANQERGKKNRAHVVPDAGTTFAVRVHDFRLYHQVCRDVITRWMYPLVPD
NASTGGVQTQYTYERGCKYKAPGVNLPRSVRLGNGVVIGADVTVGENAVI
ERSVIGDGCRIGVGAKIVDSYLWAGAEIGDGASIEGTVVASRAMAKTPA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf