prot_H-elongata_contig103065.257.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103065.257.1
Unique Nameprot_H-elongata_contig103065.257.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
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BLAST of mRNA_H-elongata_contig103065.257.1 vs. uniprot
Match: D7G007_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G007_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 4.510e-29
Identity = 74/130 (56.92%), Postives = 90/130 (69.23%), Query Frame = 0 
Query:    9 LLVPGMLRCTFSAKSNRLSSLHLSFDPSLPARQLARAAMLQGRATASMAGMMAGLLGMGGTSAAGT-GAEGGGSPPGCTGAAASSRGLTSAEM-SGVPQEAFAGQEEGVLHSVLEDLLEGRVSSTLVHNP 136
            LLVPGML+ +FS KSNRL S+  SFDP++PARQLARAAMLQGRAT  MAGMMAG+LGMGG   +    A+GGG P      A+ S G       +      F GQ+EGVLHSVL+D+ E RVSST++ +P
Sbjct:  311 LLVPGMLKASFSTKSNRLCSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLMAAKGGGVPSAARDRASESSGAXXXXXXTAANPPPFVGQDEGVLHSVLQDIREWRVSSTVLDDP 440
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BLAST of mRNA_H-elongata_contig103065.257.1 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.560e-20
Identity = 54/80 (67.50%), Postives = 61/80 (76.25%), Query Frame = 0 
Query:    5 RSQHLLVPGMLRCTFSAKSNRLSSLHLSFDPSLPARQLARAAMLQGRATASMAGMMAGLLGMGGTSAAGTGAEGGGSPPG 84
            RS  LLVPGML+ +FS KSNRL S+  SFDP++PARQLARAAMLQGRAT  MAGMMAG+LGMGG   +   A  GG  PG
Sbjct:  531 RSPQLLVPGMLKASFSTKSNRLCSVQFSFDPTVPARQLARAAMLQGRATPGMAGMMAGMLGMGGVDVSSLMAAKGGGVPG 610
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103065.257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G007_ECTSI4.510e-2956.92BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KRD8_9PHAE3.560e-2067.50BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103065contigH-elongata_contig103065:260..1227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103065.257.1mRNA_H-elongata_contig103065.257.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103065 260..1227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103065.257.1 ID=prot_H-elongata_contig103065.257.1|Name=mRNA_H-elongata_contig103065.257.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MLKHRSQHLLVPGMLRCTFSAKSNRLSSLHLSFDPSLPARQLARAAMLQG
RATASMAGMMAGLLGMGGTSAAGTGAEGGGSPPGCTGAAASSRGLTSAEM
SGVPQEAFAGQEEGVLHSVLEDLLEGRVSSTLVHNPTHGES
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