prot_H-elongata_contig103023.255.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig103023.255.1
Unique Nameprot_H-elongata_contig103023.255.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
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BLAST of mRNA_H-elongata_contig103023.255.1 vs. uniprot
Match: D7G9I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I6_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.480e-35
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 0 
Query:    1 ERVRREKQRREEAAELLTQLRDKLETDKERARRTYMESRSFEVAVVHYTEAISSMEDLVYHVRLHGDENGS--VSTADEL-RRRLAPLFWSRAAAHIMIGRYRSAVTDCALALESNKDFDQ 118
            ER++RE+Q+R +A   L +LR + E+DKE ARRTYMES+SFE A + YT AI S+EDL++H++LHGDE G+     AD   R+RLAPL+WSRAAAHIMIGRYRSAV DCALALES  D+DQ
Sbjct:  225 ERMQREEQQRLQAVANLERLRKRHESDKESARRTYMESKSFEAAALEYTTAIRSLEDLLFHIKLHGDERGNRGEGAADGGGRKRLAPLYWSRAAAHIMIGRYRSAVKDCALALESAADWDQ 345
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103023.255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G9I6_ECTSI2.480e-3563.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..34
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..118
e-value: 1.3E-8
score: 36.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 34..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103023contigH-elongata_contig103023:1372..2087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103023.255.1mRNA_H-elongata_contig103023.255.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig103023 1372..2087 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig103023.255.1 ID=prot_H-elongata_contig103023.255.1|Name=mRNA_H-elongata_contig103023.255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
ERVRREKQRREEAAELLTQLRDKLETDKERARRTYMESRSFEVAVVHYTE
AISSMEDLVYHVRLHGDENGSVSTADELRRRLAPLFWSRAAAHIMIGRYR
SAVTDCALALESNKDFDQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf