mRNA_H-elongata_contig103023.255.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-elongata_contig103023.255.1 vs. uniprot
Match: D7G9I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I6_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.480e-35 Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 1 Query: 1 ERVRREKQRREEAAELLTQLRDKLETDKERARRTYMESRSFEVAVVHYTEAISSMEDLVYHVRLHGDENGS--VSTADEL-RRRLAPLFWSRAAAHIMIGRYRSAVTDCALALESNKDFDQ 354
ER++RE+Q+R +A L +LR + E+DKE ARRTYMES+SFE A + YT AI S+EDL++H++LHGDE G+ AD R+RLAPL+WSRAAAHIMIGRYRSAV DCALALES D+DQ
Sbjct: 225 ERMQREEQQRLQAVANLERLRKRHESDKESARRTYMESKSFEAAALEYTTAIRSLEDLLFHIKLHGDERGNRGEGAADGGGRKRLAPLYWSRAAAHIMIGRYRSAVKDCALALESAADWDQ 345 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103023.255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig103023.255.1 >prot_H-elongata_contig103023.255.1 ID=prot_H-elongata_contig103023.255.1|Name=mRNA_H-elongata_contig103023.255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp ERVRREKQRREEAAELLTQLRDKLETDKERARRTYMESRSFEVAVVHYTEback to top mRNA from alignment at H-elongata_contig103023:1372..2087+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig103023.255.1 ID=mRNA_H-elongata_contig103023.255.1|Name=mRNA_H-elongata_contig103023.255.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=716bp|location=Sequence derived from alignment at H-elongata_contig103023:1372..2087+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig103023:1372..2087+ >mRNA_H-elongata_contig103023.255.1 ID=mRNA_H-elongata_contig103023.255.1|Name=mRNA_H-elongata_contig103023.255.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=708bp|location=Sequence derived from alignment at H-elongata_contig103023:1372..2087+ (Himanthalia elongata Himel1 dioecious)back to top |