prot_H-elongata_contig102942.251.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102942.251.1
Unique Nameprot_H-elongata_contig102942.251.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length132
Homology
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A836CLA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.070e-17
Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 0
Query:   14 KLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWFHR--------AAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAAEWHYLAVDQG 94
            + AA++GH +A+WL+GR YYEG+G    ++ EA  WF R        AA +GSA+GQ YL G+++EYG GVPK+ +RA  WH  A  QG
Sbjct:  133 RSAAAKGHAEALWLVGRCYYEGRGA-AQNYTEAAAWFDRLWEECTAGAAGRGSAKGQFYL-GVLNEYGYGVPKDTKRAIAWHLRAARQG 219          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: D8LE06_ECTSI (Sel1 domain protein repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE06_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.140e-12
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0
Query:   31 MYYEGKGVGVVDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLGVPKNQR 81
            M+ EGKGV  VDF EAN+WFHRAAAKG+A GQH+L GI  EYG GV K+ R
Sbjct:    1 MHCEGKGVAKVDFDEANKWFHRAAAKGNARGQHHL-GIAHEYGSGVTKDLR 50          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A839IR32_9GAMM (Sel1 repeat family protein n=1 Tax=Oceanospirillum sp. D5 TaxID=2760088 RepID=A0A839IR32_9GAMM)

HSP 1 Score: 59.3 bits (142), Expect = 2.490e-8
Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 0
Query:    6 HRAATAWFKLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLG-VPKNQRRAAEWHYLAVDQG 94
            HR   AWFK AASEGH+ A  + G + Y  +G   VD G+   +   AA +G A+ Q+ +A I  E G G + KN   A  W   A +QG
Sbjct:   32 HRWIMAWFKQAASEGHLKAQSMYGHLLYF-RGASPVDKGQGANYLLDAAKRGDAKAQYQIACIY-ETGFGHLQKNYENAVRWFVKAAEQG 119          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A1U9NQJ7_9BACT (Putative beta-lactamase HcpC n=1 Tax=Anaerohalosphaera lusitana TaxID=1936003 RepID=A0A1U9NQJ7_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.210e-7
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   13 FKLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAAEWHYLAVDQGLAD 97
            +  +A  G++DAM+ +G  + EGKG    D+  A  WF +AA  G A     LA +  E G+G+ KN+ +AAEW+  A  Q + D
Sbjct:   45 YSRSARMGNVDAMYQMGLFHLEGKGGVDRDYAVAMGWFEKAARTGHALAMGKLADMYAE-GMGIFKNELKAAEWYQKASQQAIRD 128          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A1H3MYG3_9BURK (Uncharacterized protein n=1 Tax=Collimonas sp. OK242 TaxID=1798195 RepID=A0A1H3MYG3_9BURK)

HSP 1 Score: 55.5 bits (132), Expect = 1.640e-6
Identity = 30/77 (38.96%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    9 ATAWFKLAASEGHIDAMWLLGRMYYEGKGVGV-VDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAA 84
            A AW + AA+   ++A + LG+ +Y+G G+G  +D+G+A  W+ RAA  G+A+    LA +  +YG GVP++ +R+A
Sbjct:   82 AGAWLQNAAAANDVEAQFQLGQAFYQG-GLGFQLDYGQAWNWYERAAVAGNAKAGFMLARMA-KYGEGVPRDLKRSA 156          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A831PJR1_9DELT (Sel1 repeat family protein n=1 Tax=Geoalkalibacter subterraneus TaxID=483547 RepID=A0A831PJR1_9DELT)

HSP 1 Score: 54.7 bits (130), Expect = 2.750e-6
Identity = 33/100 (33.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:   12 WFKLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAAEWHYLAVDQGLADSNNHLGLMKAHGKG 111
            W ++AA  G+ DA++ LGR+Y +G+GV  VD  ++ E+F  AA K      H +  +  E     P     A +W   A D G AD+ N L ++    +G
Sbjct:    3 WLQMAADAGYGDALYALGRIYEQGRGV-EVDREQSFEFFSAAARKNHPGAMHQMGRLALEQDA--PDAAVHALDWFRRAADSGEADALNDLAVLFLRQQG 99          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A1I3CEV3_9BURK (Uncharacterized protein n=3 Tax=Collimonas TaxID=202907 RepID=A0A1I3CEV3_9BURK)

HSP 1 Score: 53.9 bits (128), Expect = 5.890e-6
Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    9 ATAWFKLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAAE 85
            A AW + AA+    +A + LG+ +Y+G+    VD+G+A  W+ RAA  G+A+    LA +  +YG GVP++ + +A+
Sbjct:   82 AGAWMQNAAAANEPEAQFQLGQAFYQGRLGFQVDYGQAWNWYERAATSGNAKASFMLARMA-KYGEGVPQDLKLSAK 157          
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Match: A0A1Y1W8F9_9FUNG (HCP-like protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W8F9_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 7.150e-5
Identity = 35/119 (29.41%), Postives = 55/119 (46.22%), Query Frame = 0
Query:    9 ATAWFKLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWFHRAAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAAEWHYLAVDQGLADSNNHLGLMKAHGKGFSQDLTGAARHFQKVI 127
            A  WF+ AA  G  + +++ G +       G   FGEA ++F RAAA G+ E Q Y  G+    G G  KN   A E+  +A  +    +  +L  +   GK  ++D   A R  +  +
Sbjct:  228 ARGWFEEAARLGSPEGLFMAGTVL-----AGEEKFGEALDYFERAAALGNVEAQ-YNVGLYYLQGTGCEKNPELAVEYWTMAAAERFPVAMLNLAKLLMEGKEVARDRRRARRLLEAAV 340          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102942.251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836CLA6_9STRA7.070e-1748.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LE06_ECTSI1.140e-1268.63Sel1 domain protein repeat-containing protein n=1 ... [more]
A0A839IR32_9GAMM2.490e-840.00Sel1 repeat family protein n=1 Tax=Oceanospirillum... [more]
A0A1U9NQJ7_9BACT2.210e-737.65Putative beta-lactamase HcpC n=1 Tax=Anaerohalosph... [more]
A0A1H3MYG3_9BURK1.640e-638.96Uncharacterized protein n=1 Tax=Collimonas sp. OK2... [more]
A0A831PJR1_9DELT2.750e-633.00Sel1 repeat family protein n=1 Tax=Geoalkalibacter... [more]
A0A1I3CEV3_9BURK5.890e-636.36Uncharacterized protein n=3 Tax=Collimonas TaxID=2... [more]
A0A1Y1W8F9_9FUNG7.150e-529.41HCP-like protein n=1 Tax=Linderina pennispora TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 96..131
e-value: 63.0
score: 6.7
coord: 59..95
e-value: 1.2
score: 18.2
coord: 22..58
e-value: 1.1E-5
score: 34.8
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 3..21
e-value: 0.57
score: 11.0
coord: 60..94
e-value: 7.0E-5
score: 23.4
coord: 97..125
e-value: 25.0
score: 5.7
coord: 23..58
e-value: 2.2E-8
score: 34.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..129
e-value: 2.6E-30
score: 108.1
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 2..125
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 4..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102942contigH-elongata_contig102942:300..2286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102942.251.1mRNA_H-elongata_contig102942.251.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102942 300..2286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102942.251.1 ID=prot_H-elongata_contig102942.251.1|Name=mRNA_H-elongata_contig102942.251.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp
GGSRDHRAATAWFKLAASEGHIDAMWLLGRMYYEGKGVGVVDFGEANEWF
HRAAAKGSAEGQHYLAGIVDEYGLGVPKNQRRAAEWHYLAVDQGLADSNN
HLGLMKAHGKGFSQDLTGAARHFQKVIIHPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf