prot_H-elongata_contig10285.247.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10285.247.1
Unique Nameprot_H-elongata_contig10285.247.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length353
Homology
BLAST of mRNA_H-elongata_contig10285.247.1 vs. uniprot
Match: A0A6H5JU55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU55_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 1.070e-127
Identity = 238/482 (49.38%), Postives = 278/482 (57.68%), Query Frame = 0
Query:    1 MSQEMGDMHSATARTLQKHIDPIVVAVDESFDEVFRKVRMGFKCEKGRKKVKIPVKKHFLAHNMPKILERLFQ-SAGIEEGAIYNTTYPEIAACLIAARSGRRDAPGFHVDKDSGTVEVTLIDVSFDGSYRNRNHASHGVNVIVSGKRMSPDDRGLMDGVIDQ-------------------------------------------------------------------------------------------------------------------------------KNMKKAIVKFAAGYASRACRYFAWCVRAARERVETSVDGSVTLAEAFTESFAHLVFHLQGVHKYCSSGCAEAEEEIVE-EEPRPGQVEQPDIFDIEALRGASESGLGASAMPQNPAARGTPGAGDADAFLTGDVDRDGAKKSGKKKLRPCVGSQFTAASLRQSLDDAVDLSTVKEKLWDRILLSISSEREAG 353
            MSQEMGD+ S T+RTLQ+HI+  VVAVDES++E+F++VR   K E GR+ V+IP++KHF AH+M  +LE L Q   G+++G+I NTTYPEIAA +IAA++ +R+ PGF ++   G V  TL+++SFDGSYRNRNH SHGVNV+ S KR  PD RGLMD V+DQ                                                                                                                               KNMKKAIVKFA+GYASRACRYFAW VR ARE VE  VD S+TLAEAFTE FAHLVFHLQGVHKYCSSGCA AEE + E EEPR G VEQPDIFDIE LR  SE  LGA+AMPQNP  R TPGAGDA+A     V  D AKK GKK LRPC GSQFTAASLRQ+LDD V LS VKE+LW R+ L+I   R AG
Sbjct:  619 MSQEMGDIQSPTSRTLQRHIEETVVAVDESWEEMFKEVRKSIKNEPGRRTVEIPIEKHFFAHHMVSLLEELKQYGVGVKDGSIDNTTYPEIAAGIIAAKTAKREGPGFQLE--GGKVVATLVNISFDGSYRNRNHTSHGVNVVASVKRTKPDHRGLMDSVLDQVTFGRHIGEDAPLQPVCALSRNKGFCRVHGKAEDWDSRRRPAKGSSPEEEDAAKRLRHGNCYSSTCLRSPLSAPATEPLGIMILCLRLMYEGFWVNAFAHDQDAGIGHIVRGLFDDALECLDRAHIQKNMKKAIVKFASGYASRACRYFAWVVREAREVVERCVDDSITLAEAFTEGFAHLVFHLQGVHKYCSSGCAGAEEHVAEGEEPRAGNVEQPDIFDIEELRVDSEPDLGATAMPQNPVTRATPGAGDAEASSAAGVGEDVAKKGGKKSLRPCRGSQFTAASLRQTLDDTVSLSKVKEQLWVRVSLTILFFRAAG 1098          
BLAST of mRNA_H-elongata_contig10285.247.1 vs. uniprot
Match: A0A6H5JHR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR1_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 2.250e-98
Identity = 195/432 (45.14%), Postives = 218/432 (50.46%), Query Frame = 0
Query:   79 EGAIYNTTYPEIAACLIAARSGRRDAPGFHVDKDSGTVEVTLIDVSFDGSYRNRNHASHGVNVIVSGKRMSPDDRGLMDGVIDQ------------------------------------------------------------------------------------------------------------------------------------------------------------KNMKKAIVKFAAGYASRACRYFAWCVRAARERVETSVDGSVTLAEAFTESFAHLVFHLQGVHKYCSSGCAEAEEEIVE-EEPRPGQVEQPDIFDIEALRGASESGLGASAMPQNPAARGTPGAGDADAFLTGDVDRDGAKKSGKKKLRPCVGSQFTAASLRQSLDDAVDLSTVKEKLWDRILLSISSEREAG 353
            +G+I NTTYPEIAA +IAA++ +R+ PGF ++   G V  TL+++SFDGSYRNRNH SHGVNV+ S KRM PD RGLMD V+DQ                                                                                                                                                            KNMKKAIVKFA+GYASRACRYFAW VR ARE VE  VD S+TLAEAFTE FAHLVFHLQGVHKYCSSGCA AEE + E EEPR G VEQPDIFDIE LR  SE  LGA+AMPQNP  R TPGAGDA+A     V  D AKK GKK LRPC GSQFTAASLRQ+LDD V LS VKE+LW R+ L+I   R AG
Sbjct:    2 DGSIDNTTYPEIAAGIIAAKTAKREGPGFQLE--GGKVVATLVNISFDGSYRNRNHTSHGVNVVASVKRMKPDHRGLMDSVLDQVTFGRHIGKDAPLQPVCALSRNKGFCRVHGKAEDWDSRRRPAKGSSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAAKRLRHGNCYSSTCLRSPLSAPATEPLGIMILCLRLMYEGFWVNAFAHDQDAGIGHIVRGLFDDALECLDRAHIQKNMKKAIVKFASGYASRACRYFAWVVREAREVVERCVDDSITLAEAFTEGFAHLVFHLQGVHKYCSSGCAGAEEHVAEGEEPRAGNVEQPDIFDIEELRVDSEPDLGATAMPQNPVTRATPGAGDAEASSAAGVGEDVAKKGGKKSLRPCRGSQFTAASLRQTLDDTVSLSKVKEQLWVRVSLTILFFRAAG 431          
BLAST of mRNA_H-elongata_contig10285.247.1 vs. uniprot
Match: A0A6H5L2W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W2_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 8.150e-27
Identity = 63/155 (40.65%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    5 MGDMHSATARTLQKHIDPIVVAVDESFDEVFRKVRMGFKCEKGRKKVKIPVKKHFLAHNMPKILERLFQSAGIEEGAIYNTTYPEIAACLIAARSGRRDAPGFHVDKDSGTVEVTLIDVSFDGSYRNRNHASHGVNVIVSGKRMSPDDRGLMDGV 159
            + D  + + RTL +++  I VAVD  F    +K R G K E GR  +++P++KH+ AHN  ++ E   +   I+EG I NTT+ +IA  L+ +   R + PG+ V+ D   V VT ++V+FDGSYRNRNH +H +NV+ S K    ++RGL D V
Sbjct:  572 LSDWQAPSKRTLYRYLTEISVAVDVVFSREMKKHREGLKQEPGRGVIRVPIEKHYFAHNETRLKELAKEQGPIKEGHISNTTWTDIAVGLLRSMEDRGEEPGYKVEGD--VVVVTPLEVAFDGSYRNRNHTAHSINVVCSLKLREQNNRGLRDAV 724          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10285.247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JU55_9PHAE1.070e-12749.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHR1_9PHAE2.250e-9845.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2W2_9PHAE8.150e-2740.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10285contigH-elongata_contig10285:2946..5145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10285.247.1mRNA_H-elongata_contig10285.247.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10285 2676..5145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10285.247.1 ID=prot_H-elongata_contig10285.247.1|Name=mRNA_H-elongata_contig10285.247.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=353bp
MSQEMGDMHSATARTLQKHIDPIVVAVDESFDEVFRKVRMGFKCEKGRKK
VKIPVKKHFLAHNMPKILERLFQSAGIEEGAIYNTTYPEIAACLIAARSG
RRDAPGFHVDKDSGTVEVTLIDVSFDGSYRNRNHASHGVNVIVSGKRMSP
DDRGLMDGVIDQKNMKKAIVKFAAGYASRACRYFAWCVRAARERVETSVD
GSVTLAEAFTESFAHLVFHLQGVHKYCSSGCAEAEEEIVEEEPRPGQVEQ
PDIFDIEALRGASESGLGASAMPQNPAARGTPGAGDADAFLTGDVDRDGA
KKSGKKKLRPCVGSQFTAASLRQSLDDAVDLSTVKEKLWDRILLSISSER
EAG
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