prot_H-elongata_contig102774.240.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102774.240.1
Unique Nameprot_H-elongata_contig102774.240.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
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BLAST of mRNA_H-elongata_contig102774.240.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 3.340e-10
Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:   14 TLDKANVRHCIPQAPRLVDASAAGPNALIVAWSGVPSPTSGCTVSSYRVEV 64
            T  ++ V    P AP +VDASAAGPN L+V WSGVPS  SG TVSSYR+EV
Sbjct: 8303 TTPRSMVPRAAPGAPGMVDASAAGPNDLMVTWSGVPSSISGSTVSSYRIEV 8353
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102774.240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNA6_ECTSI3.340e-1062.75Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102774contigH-elongata_contig102774:203..394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102774.240.1mRNA_H-elongata_contig102774.240.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102774 203..406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102774.240.1 ID=prot_H-elongata_contig102774.240.1|Name=mRNA_H-elongata_contig102774.240.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MCMLLVSDAYDLRTLDKANVRHCIPQAPRLVDASAAGPNALIVAWSGVPS
PTSGCTVSSYRVEV
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