prot_H-elongata_contig10274.237.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10274.237.1
Unique Nameprot_H-elongata_contig10274.237.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
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BLAST of mRNA_H-elongata_contig10274.237.1 vs. uniprot
Match: A0A6H5JRF5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRF5_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 3.800e-33
Identity = 74/112 (66.07%), Postives = 85/112 (75.89%), Query Frame = 0 
Query:    9 QYAKGAITAVDLVRYLEKDVASKVSGCDLDDVVAAALARIPDTRKQDLLSKASRGRAIGPGGAAVSSGMSRGGS-DVIVNGQCGN-YAMSQGGQRVSSGKSTIYNGVEIGKE 118
            QYA+GAITA DLVR LE++V   + GCDL+D VAAAL   PD RK+DLLSKAS GRAIGPGG+    G SRGG  DV V G  G  Y MSQGG R+SSGKS+I+NGVE+GKE
Sbjct:  124 QYAQGAITAGDLVRSLEREVVVLIPGCDLEDAVAAALEATPDMRKRDLLSKASGGRAIGPGGSTRRLGASRGGRPDVTVEGGRGQQYLMSQGGARISSGKSSIFNGVEVGKE 235
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10274.237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRF5_9PHAE3.800e-3366.07Protein kinase domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10274contigH-elongata_contig10274:6437..7242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10274.237.1mRNA_H-elongata_contig10274.237.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10274 5924..7242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10274.237.1 ID=prot_H-elongata_contig10274.237.1|Name=mRNA_H-elongata_contig10274.237.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MRTINTSLQYAKGAITAVDLVRYLEKDVASKVSGCDLDDVVAAALARIPD
TRKQDLLSKASRGRAIGPGGAAVSSGMSRGGSDVIVNGQCGNYAMSQGGQ
RVSSGKSTIYNGVEIGKEVR*
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