prot_H-elongata_contig102721.234.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102721.234.1
Unique Nameprot_H-elongata_contig102721.234.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: D7FPY1_ECTSI (FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY1_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 7.330e-119
Identity = 179/207 (86.47%), Postives = 191/207 (92.27%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEA---SFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDGEKKPAGW 204
            QVSTEAIDATVNLDG KRSNYDPDEM+EEQRER +RKR NNAFKDFA+KVT+AA  DGQ LEFDIPFDQLGF GKPFKEA   + M FIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFS+SKTCD+KIIMKENMLENGGEP+ IDMIDQNKYLNK+M WLEECEITYTQTAKPWNWK MM DIRGDNRFYLD+Y+DGE+KPAGW
Sbjct:  735 QVSTEAIDATVNLDGVKRSNYDPDEMMEEQRERGMRKRRNNAFKDFASKVTKAASRDGQSLEFDIPFDQLGFGGKPFKEARTNTLMGFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSSSKTCDMKIIMKENMLENGGEPKTIDMIDQNKYLNKIMQWLEECEITYTQTAKPWNWKAMMADIRGDNRFYLDTYEDGERKPAGW 941          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A835Z130_9STRA (FACT complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z130_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.140e-70
Identity = 125/211 (59.24%), Postives = 158/211 (74.88%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENG--GEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDS-----YDDGEKKPAGW 204
            QV TEA+D+TVNLD A+RS+YDPDE++EEQ++++LRKRLN AFKDFAAKV++ A  + Q LEFDIP+ +LGFQG P KE   MVFIQPTTYAL+NVTD P FVV  ++IEHVHFERV    +  DLKII + N+  +    EP  I+MI+Q K+LN++M WL +  ITYTQT K WNWK ++  +R D RFYLD+      +DG KKPAGW
Sbjct:  547 QVYTEAVDSTVNLDNARRSHYDPDEIMEEQQDKKLRKRLNQAFKDFAAKVSKVAARNQQTLEFDIPYKELGFQGTPHKE---MVFIQPTTYALLNVTDQPAFVVLTDDIEHVHFERVNPNGRNFDLKIITRANVAADQPPSEPLSINMIEQ-KFLNQIMGWLVDSSITYTQTDKTWNWKAVLNLVREDERFYLDTGKSTEQEDGTKKPAGW 753          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A7S3XXU1_HETAK (FACT complex subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXU1_HETAK)

HSP 1 Score: 193 bits (491), Expect = 1.870e-53
Identity = 102/206 (49.51%), Postives = 142/206 (68.93%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGD-NRFYLDSYDD-GEKKPAGW 204
            Q  TEA++A+VNLD A++S YDPDEMVEEQRER+L KRL+  FKDF  K+ + A A GQ L+F++P+  LG+ G P +E   MV++QPT   L+NV D PFFVV LN++EHVHFERV  ++K  D+ I+MK+  LE   +P+ IDMI+ +KYL+++  WL +   TYT       WK ++  ++ + + FYLD  +  GE KPAGW
Sbjct:  765 QFYTEAMEASVNLDAARKSAYDPDEMVEEQRERELAKRLDATFKDFTRKIEKVAGAHGQKLKFEVPYHDLGWHGTPHRE---MVYVQPTVSCLVNVVDTPFFVVDLNQVEHVHFERVMFSAKNFDMVIVMKD--LEE--QPKRIDMIE-SKYLDRIQDWLTDMGFTYTSGPANLQWKAILQTVKEEGHHFYLDRDEGTGEAKPAGW 962          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: K0SMK5_THAOC (FACT complex subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SMK5_THAOC)

HSP 1 Score: 184 bits (466), Expect = 2.360e-53
Identity = 102/205 (49.76%), Postives = 132/205 (64.39%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDG-EKKPAGW 204
            Q  TE +DA+  +DG +RS YDPDEM +EQRERQLRKRLN AFKDF  KV   AR +G  LEFDIP+  LGF G P KE   MV I PT   L N+T+ PFFVV L+ ++HVHFERV   SK  D+ +I K+   +    P  +DMI  N+  + +  WL + EI+YT+     NWK +M  + GD+RFY+D+ +D   +K AGW
Sbjct:   84 QFFTEVVDASQAVDGNRRSMYDPDEMDDEQRERQLRKRLNEAFKDFCRKVENVARKNGYTLEFDIPYRDLGFMGNPNKE---MVMIMPTLNCLCNLTETPFFVVDLSNVDHVHFERVTFMSKAFDMVLINKDFTKQ----PWRVDMIP-NEEKDSIQEWLTDMEISYTEGPMNLNWKSIMSTVVGDDRFYMDTEEDEVTQKEAGW 280          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A7S4VDK5_9STRA (FACT complex subunit n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDK5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 7.700e-53
Identity = 100/205 (48.78%), Postives = 133/205 (64.88%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDG-EKKPAGW 204
            Q  TE IDA+  +D  +RS YDPDEM +EQRERQLR++LN AFK+F  KV   A+ +G  LEFDIP+  LGF G P KE   MVFIQPT   L+N+T+ PFFVV L++++HVHFERV   SK  D+ +I K+       +P  +DMI  N     +  WL + E++YT+     NWK +M  + GD+RFY+D+ +D   KK AGW
Sbjct:  135 QFFTEVIDASQTVDAGRRSMYDPDEMDDEQRERQLRRKLNEAFKEFCRKVENVAKKNGFSLEFDIPYRDLGFNGNPHKE---MVFIQPTLNCLVNLTETPFFVVNLSDVDHVHFERVTFMSKAFDIVLINKDF----SKQPWRVDMIP-NDDKESIQEWLTDMELSYTEGPMNLNWKQIMGTVAGDDRFYMDTEEDEVTKKEAGW 331          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A7S1CWN1_CYCTE (FACT complex subunit (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWN1_CYCTE)

HSP 1 Score: 179 bits (453), Expect = 4.550e-52
Identity = 97/205 (47.32%), Postives = 130/205 (63.41%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDG-EKKPAGW 204
            Q  TE +DA+  +D  +RS YDPDEM +E RER LRK+LN AFK+F  KV   A+ +   LEFDIP+  LGF G P KE   MVF+QPT   L+N+T+ PFFVV L +++HVHFER+   SK  D+ +I K+       +P  IDMID N   + +  WL + EITYTQ     NWK +M  +  D+RFY+++ +D   +K AGW
Sbjct:   11 QFLTEVVDASQTVDAGRRSMYDPDEMDDENRERMLRKKLNQAFKEFCKKVEAVAKKNNFSLEFDIPYRDLGFMGNPHKE---MVFVQPTLNCLVNITETPFFVVDLADVDHVHFERITYMSKAFDVVLINKDF----SKQPWRIDMID-NSDKDAIQEWLTDMEITYTQGPMNLNWKSIMNTVGSDDRFYMNTEEDEVTEKEAGW 207          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: F0YPC0_AURAN (FACT complex subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPC0_AURAN)

HSP 1 Score: 179 bits (455), Expect = 7.700e-52
Identity = 94/204 (46.08%), Postives = 130/204 (63.73%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDGEKKPAGW 204
            Q STE +DA+V LD A+RS YDPDE+ EEQRER LRK+LN  FK+F  K+ R A+     LEFDIP+  L F G P +E   MV IQPT + L+N+T+ PFF+V L+ +EHVHFER    +   D+ II+K   L     P  ++ +   + L+ +  WL +C +TYT      +WK +M  +R D+RFY ++ ++GE KPAGW
Sbjct:   86 QFSTEVVDASVALDSARRSMYDPDELDEEQRERHLRKKLNEMFKEFCKKMERVAKQHHYDLEFDIPYRDLSFHGVPNRE---MVLIQPTVHCLVNLTETPFFIVELDHVEHVHFERCTLRATNFDMVIILKNFELA----PLSVNAVPVQE-LDAIQEWLTDCSLTYTAGQASMSWKSVMNLVRSDDRFYEETDENGEPKPAGW 281          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A7S0AWW6_9STRA (FACT complex subunit (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWW6_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.040e-51
Identity = 96/205 (46.83%), Postives = 132/205 (64.39%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDG-EKKPAGW 204
            Q  TE +DA+  +D  +RS YDPDEM +EQRERQLRK+LN AFK+F  KV   AR +   +EFDIP+  LGFQG P KE   MVFI PT   L+N+T+ PFFVV L++++HVHFERV   SK  D+ ++ K+       +P  +DMI  N   + +  WL + EI+YT+     NWK +M  +  D+RFY+++ +D   +K AGW
Sbjct:   32 QFFTEVVDASQTVDMGRRSMYDPDEMDDEQRERQLRKKLNEAFKEFCRKVENTARKNDYTVEFDIPYRDLGFQGNPNKE---MVFIMPTLNCLVNLTETPFFVVDLSDVDHVHFERVTFASKAFDMVLVNKDF----NKQPARVDMIP-NGDKDAIQEWLTDMEISYTEGPMNLNWKQIMQTVAADDRFYMNTEEDEVTEKEAGW 228          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A6A5B037_9STRA (FACT complex subunit (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B037_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.570e-51
Identity = 92/204 (45.10%), Postives = 131/204 (64.22%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDGEKKPAGW 204
            Q  TE I+++  LD  +RS YDPDE+ EE RER LR++LN  FKDF  KV R +    + + FDIP+ +LGF G PFKE   MV +QPT + L+++T+FPFF+  L+++EHVHFERVF  SK  D+  + K   L     P  +  I  N+ L ++  WL++  I +T+     NWK +M+ I+ D+RFYL++ +DG  KPAGW
Sbjct:  158 QFYTEVIESSQALDNRRRSMYDPDELDEENRERSLREKLNLTFKDFCQKVERVSEQIDKTIAFDIPYRELGFSGTPFKE---MVLLQPTVHCLVSLTEFPFFITLLDDVEHVHFERVFFGSKNFDMVFVYKNFNLV----PVRVSAISTNE-LERIKEWLDDINICFTEGTANLNWKQIMVTIKADDRFYLETDEDGVPKPAGW 353          
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Match: A0A7S0GEE7_9STRA (FACT complex subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEE7_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.630e-51
Identity = 99/205 (48.29%), Postives = 135/205 (65.85%), Query Frame = 0
Query:    1 QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKVTRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFPFFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQNKYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDG-EKKPAGW 204
            QV TE +DA++ +D  +RS YDPDEM +EQRERQLRK+LN AFK+F  KV   A+ +G  LEFDIP+  LGF G P  +   MVF+QPT   L+NVTD PFFV  L+E++HVHFERV   SKT D+ +I K+       +P  +DMI  N   + +  WL + E++YT+     NWK +M+   GD+RFY+++ +D   +K AGW
Sbjct:  456 QVFTEVVDASLQVDAGRRSMYDPDEMDDEQRERQLRKKLNQAFKEFCRKVESTAKKNGYSLEFDIPYRDLGFNGTPHNQ---MVFVQPTLNCLVNVTDTPFFVTDLSEVDHVHFERVTFMSKTFDVVLINKDF----SKQPWRVDMIP-NSDKDAIQDWLTDMELSYTEGPMNLNWKQIMLTCAGDDRFYMNTEEDEITQKEAGW 652          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102721.234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPY1_ECTSI7.330e-11986.47FACT complex subunit n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z130_9STRA2.140e-7059.24FACT complex subunit n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3XXU1_HETAK1.870e-5349.51FACT complex subunit n=1 Tax=Heterosigma akashiwo ... [more]
K0SMK5_THAOC2.360e-5349.76FACT complex subunit n=1 Tax=Thalassiosira oceanic... [more]
A0A7S4VDK5_9STRA7.700e-5348.78FACT complex subunit n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1CWN1_CYCTE4.550e-5247.32FACT complex subunit (Fragment) n=1 Tax=Cyclophora... [more]
F0YPC0_AURAN7.700e-5246.08FACT complex subunit n=1 Tax=Aureococcus anophagef... [more]
A0A7S0AWW6_9STRA1.040e-5146.83FACT complex subunit (Fragment) n=1 Tax=Minutocell... [more]
A0A6A5B037_9STRA1.570e-5145.10FACT complex subunit (Fragment) n=1 Tax=Aphanomyce... [more]
A0A7S0GEE7_9STRA1.630e-5148.29FACT complex subunit n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 72..170
e-value: 2.8E-18
score: 76.7
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 80..168
e-value: 2.2E-16
score: 60.0
NoneNo IPR availableGENE3D2.30.29.150coord: 1..59
e-value: 2.7E-10
score: 42.1
NoneNo IPR availablePANTHERPTHR13980:SF15FACT COMPLEX SUBUNIT SPT16coord: 4..192
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 65..197
e-value: 9.6E-37
score: 127.5
IPR040258FACT complex subunit Spt16PANTHERPTHR13980CDC68 RELATEDcoord: 4..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102721contigH-elongata_contig102721:414..2252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102721.234.1mRNA_H-elongata_contig102721.234.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102721 414..2252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102721.234.1 ID=prot_H-elongata_contig102721.234.1|Name=mRNA_H-elongata_contig102721.234.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
QVSTEAIDATVNLDGAKRSNYDPDEMVEEQRERQLRKRLNNAFKDFAAKV
TRAARADGQHLEFDIPFDQLGFQGKPFKEASFMVFIQPTTYALINVTDFP
FFVVPLNEIEHVHFERVFSTSKTCDLKIIMKENMLENGGEPRMIDMIDQN
KYLNKVMSWLEECEITYTQTAKPWNWKLMMMDIRGDNRFYLDSYDDGEKK
PAGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013719DUF1747
IPR011993PH-like_dom_sf
IPR040258Spt16