prot_H-elongata_contig102278.200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102278.200.1
Unique Nameprot_H-elongata_contig102278.200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
BLAST of mRNA_H-elongata_contig102278.200.1 vs. uniprot
Match: A0A6H5KVF1_9PHAE (Magnesium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVF1_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 5.860e-67
Identity = 115/151 (76.16%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    1 APSLPETLPAGPVNPSSRKVPVLRLSSTGTAVETTLSRQQLAAELDCPLRDLRVADPTFPGQFPSVLARCSSIVFSVKDVKAVIRSNELLLFPTTPEVLSVVTAVQEKRGAGGMGLGCVPFEHTAVECCLKHVCEDLLESVRNVEPRLRKV 151
            AP L E LPAGPVNPSSR VPVLRLSS G AVET LSRQQLAA+L+CPLRDLR+ADPTFPGQFPSVLAR  SI+FSV +VKAVI SNE+LLFPT P+VLS+V AVQEK     +G+  VPFE T +ECCLKHVC+DLLES RNVEPRLR V
Sbjct:  129 APLLQEGLPAGPVNPSSRSVPVLRLSSDGAAVETALSRQQLAAKLNCPLRDLRMADPTFPGQFPSVLARRGSIIFSVGEVKAVILSNEVLLFPTKPDVLSIVPAVQEKIK---LGINAVPFEQTVMECCLKHVCKDLLESARNVEPRLRTV 276          
BLAST of mRNA_H-elongata_contig102278.200.1 vs. uniprot
Match: A0A835ZID1_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.130e-16
Identity = 40/104 (38.46%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   49 LRDLRVADPTFPGQFPSVLARCSSIVFSVKDVKAVIRSNELLLF-PTTPEVLSVVTAVQEKRGAGGMGLGCVPFEHTAVECCLKHVCEDLLESVRNVEPRLRKV 151
            +RDLR+ DP+FPGQ+P+VL+R ++I+ S  +++AVI ++E+ L  P+  E +++  AV+++     M     PFEH A+ECCL  +C      ++ + P LR+V
Sbjct:    1 MRDLRLMDPSFPGQYPAVLSRKNAILVSASNIRAVITASEVYLGNPSHKEAIAIAEAVRQQLMTSNM-----PFEHIALECCLSQICASQSAQLQVLRPYLRQV 99          
BLAST of mRNA_H-elongata_contig102278.200.1 vs. uniprot
Match: A0A4D9D8F3_9STRA (Magnesium transporter n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.610e-13
Identity = 45/148 (30.41%), Postives = 75/148 (50.68%), Query Frame = 0
Query:   15 PSSRKVPVLRLSSTGTAVETTLSRQQLAAELDCPLRDLRVADPTFPGQFPSVLARCSSIVFSVKDVKAVIRSNELLLF-----------PTTPEVLSVVTAVQEKRGAGGMGLGCVPFEHTAVECCLKHVCEDLLESVRNVEPRLRKV 151
            P  R + V+ + + GT  +  + + +LA EL CP RDLR+ D +FP    + LAR ++IV  +  ++ VIR +EL+LF           P   + L+ V A+    G         PFE  ++E  L  VC  + E ++ V P++ ++
Sbjct:  248 PKPRYLDVVSICANGTLTQRQVRKSELAVELRCPTRDLRILDTSFPSSVATFLARKNAIVVRMDRIRCVIRRDELMLFDPYNQGARGLIPLLQQQLATVAALTSAAGKNAPA-SLSPFELLSLEAVLASVCHQVHERLQVVSPQIMRI 394          
BLAST of mRNA_H-elongata_contig102278.200.1 vs. uniprot
Match: I4YA90_WALMC (Magnesium transporter n=1 Tax=Wallemia mellicola (strain ATCC MYA-4683 / CBS 633.66) TaxID=671144 RepID=I4YA90_WALMC)

HSP 1 Score: 52.8 bits (125), Expect = 3.540e-5
Identity = 41/145 (28.28%), Postives = 69/145 (47.59%), Query Frame = 0
Query:    2 PSLPETLPA--GPVNPSSRKVPVLRLSSTGTAVETTLSRQQLAAELDCPLRDLRVADPTFPGQFPSVLARCSSIVFSVKDVKAVIRSNELLLF-----------PTTPEVL-SVVTAVQEKRGAGGMGLGCVPFEHTAVECCLKH 132
            PSLP+   +   P   S+ K+ +  L S   +     +R Q+      P RDLRV D       PS+L R S IV++ + V+A++RS+ LL+            P T E++ +++ +++ +  +        PFE  A+E  L H
Sbjct:   21 PSLPQLSSSEDSPRKTSTLKLVLYSLPSLQPSELPNSTRTQICKSASIPYRDLRVLDSPLSDDEPSILIRDSCIVYAGEGVRAIVRSDRLLVVRGENDVGIGHNPATIEIIHTILLSLENRLTSNDFTKRTYPFEFNALETLLMH 165          
BLAST of mRNA_H-elongata_contig102278.200.1 vs. uniprot
Match: A0A4T0RTX6_9BASI (Magnesium transporter n=3 Tax=Wallemia mellicola TaxID=1708541 RepID=A0A4T0RTX6_9BASI)

HSP 1 Score: 52.8 bits (125), Expect = 3.880e-5
Identity = 41/145 (28.28%), Postives = 69/145 (47.59%), Query Frame = 0
Query:    2 PSLPETLPA--GPVNPSSRKVPVLRLSSTGTAVETTLSRQQLAAELDCPLRDLRVADPTFPGQFPSVLARCSSIVFSVKDVKAVIRSNELLLF-----------PTTPEVL-SVVTAVQEKRGAGGMGLGCVPFEHTAVECCLKH 132
            PSLP+   +   P   S+ K+ +  L S   +     +R Q+      P RDLRV D       PS+L R S IV++ + V+A++RS+ LL+            P T E++ +++ +++ +  +        PFE  A+E  L H
Sbjct:   21 PSLPQLSSSEDSPRKTSTLKLVLYSLPSLQPSELPNSTRTQICKSASIPYRDLRVLDSPLSDDEPSILIRDSCIVYAGEGVRAIVRSDRLLVVRGENDVGIGHNPATIEIIHTILLSLENRLTSNDFTKRTYPFEFNALETLLMH 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102278.200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KVF1_9PHAE5.860e-6776.16Magnesium transporter n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835ZID1_9STRA9.130e-1638.46Magnesium transporter n=1 Tax=Tribonema minus TaxI... [more]
A0A4D9D8F3_9STRA3.610e-1330.41Magnesium transporter n=1 Tax=Nannochloropsis sali... [more]
I4YA90_WALMC3.540e-528.28Magnesium transporter n=1 Tax=Wallemia mellicola (... [more]
A0A4T0RTX6_9BASI3.880e-528.28Magnesium transporter n=3 Tax=Wallemia mellicola T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.128.330coord: 13..95
e-value: 6.1E-9
score: 37.3
IPR039204Magnesium transporter MRS2-likePANTHERPTHR13890RNA SPLICING PROTEIN MRS2, MITOCHONDRIALcoord: 20..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102278contigH-elongata_contig102278:385..1673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102278.200.1mRNA_H-elongata_contig102278.200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102278 385..1673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102278.200.1 ID=prot_H-elongata_contig102278.200.1|Name=mRNA_H-elongata_contig102278.200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
APSLPETLPAGPVNPSSRKVPVLRLSSTGTAVETTLSRQQLAAELDCPLR
DLRVADPTFPGQFPSVLARCSSIVFSVKDVKAVIRSNELLLFPTTPEVLS
VVTAVQEKRGAGGMGLGCVPFEHTAVECCLKHVCEDLLESVRNVEPRLRK
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039204MRS2-like