prot_H-elongata_contig102188.197.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102188.197.1
Unique Nameprot_H-elongata_contig102188.197.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length225
Homology
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 6.760e-45
Identity = 79/148 (53.38%), Postives = 113/148 (76.35%), Query Frame = 0
Query:   79 VLKKQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPKNEDDYKNARRKLLREMQKLA-MQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTRAA 225
            V++K+A SS +R++FLVGLEGTGHHYM+ VL ++C+  KV CP LC +A+V+YP L+ PK+ + Y +AR++L  EM+KLA    + L  G++++ SFG+C     GMMSYPN++G  KALQ+VD +L AEEAERAG+D+R +YL R+A
Sbjct:   98 VVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSA 245          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.310e-44
Identity = 83/169 (49.11%), Postives = 116/169 (68.64%), Query Frame = 0
Query:   60 TTPPTQEPFPAFEPFYED--GVLKKQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPKNEDDYKNARRKLLREMQKLAMQVKD-LPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTRAA 225
            +T P   P P   PF  +   V++K+  SS +R++FLVGLEGTGHHY   V  + C T  VPC N CP+A+ +YP+LA P  + DY+ ARR+L RE++ LA    + +  G+A+IA F +C   K+GMMS+PN++G  KALQ+VD +L AEEAERAG+D+R +YL R+A
Sbjct:   36 STGPVPTPAPTIPPFSFEYPAVVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRS-KSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSA 203          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.530e-30
Identity = 60/122 (49.18%), Postives = 89/122 (72.95%), Query Frame = 0
Query:  105 MSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPKNEDDYKNARRKLLREMQKLA-MQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTRAA 225
            M+ VL ++C+  KV CP LC +A+V+YP L+ P++ + Y +AR++L  EM+KLA    + L  G++++ SFG+C     GMMSYPN++G  KALQ+VD +L AEEAERAG+D+R +YL R+A
Sbjct:    1 MADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSA 122          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A7S3W283_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W283_9SPIT)

HSP 1 Score: 68.2 bits (165), Expect = 2.960e-10
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   80 LKKQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCP-LAEVMYPTLANPKNE--DDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTRAA 225
            ++KQ FS+ +R +F+ GLEGTGHH    +L   C    + C N    L++++   L   K+    +  + R   L E QKL  ++K       S  S         G MSYP+  G    + H DL+L AE AE AG+DLR++   R A
Sbjct:   63 VRKQQFSNTVRFVFVAGLEGTGHHLWHAMLAGSCARSNL-CANASDTLSDLIADKLHRKKSIMFSERASGRDAQLVE-QKLVERLKIAARTVTSPTSLIIQNNALGGQMSYPDSVGTDVQMHHPDLRLLAELAEIAGVDLRVLLSMRGA 209          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A812KSC5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KSC5_9DINO)

HSP 1 Score: 68.6 bits (166), Expect = 4.540e-10
Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 0
Query:   82 KQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTL------ANPKNEDDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTR 223
            K A SS +R +F  GLEG+GHH+   ++       ++P      L+  ++         A+  +  DY     KL+ EM+   M +   P G   +A  G  P + +GMMSYPN  GK +A ++ D+   A+ AE AG+DLRI+ LTR
Sbjct:   60 KTATSSQVRFVFFAGLEGSGHHFWHEMIK------RLPINRSEDLSRALFDGQHGGFFNADEHSRGDYAEDIAKLMSEME---MNLSSTP-GCKVVALNGVEPQV-SGMMSYPNMGGKDRAGRNPDIFALAKLAEAAGVDLRIVLLTR 196          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A812H6X7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812H6X7_9DINO)

HSP 1 Score: 67.4 bits (163), Expect = 1.190e-9
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 0
Query:   82 KQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMY-----PTLANPKNEDDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIK--NGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTR 223
            K+  SS IR +F  GLEGTGHH+   +L  +  +      +   L++ ++     P L +  +E   + +   ++  M ++   +   P       + G   GI   +GMMSYPN+ G+ +  Q+ D+   A+ AE AGIDLRI+ LTR
Sbjct:   61 KKVVSSKIRFVFFAGLEGTGHHFWQEMLRRLSIS------HSADLSQELFNRRHGPGLFSSSDEQVREASAEHVVELMSEMQKNLSSAPGCNVVALNVG---GITRPSGMMSYPNFGGRDRMFQNPDMFTLAKLAEAAGIDLRIVLLTR 200          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A813BJ34_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BJ34_SYMMI)

HSP 1 Score: 66.2 bits (160), Expect = 3.190e-9
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 0
Query:   82 KQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPKNEDDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTR 223
            K+  SS +R +F  GLEGTGHH+   +L  +  +          L    + +L +  +E   ++    ++  M +    +  +P       + G      +GMMSYPN+ G  + +Q+ D+   A+ AE AGIDLRI+ LTR
Sbjct:   66 KKVVSSNVRFVFFAGLEGTGHHFWQELLRRLSISHSADLSQ--ELFNRQHGSLFSSTDERGREDLAEHVVELMSETQKNLSSVPGCNVVALNVGGTT-YPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTR 204          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A1Q9EVB9_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EVB9_SYMMI)

HSP 1 Score: 66.2 bits (160), Expect = 4.950e-9
Identity = 43/142 (30.28%), Postives = 70/142 (49.30%), Query Frame = 0
Query:   82 KQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPKNEDDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTR 223
            K+  SS +R +F  GLEGTGHH+   +L  +  +          L    + +L +  +E   ++    ++  M +    +  +P       + G      +GMMSYPN+ G  + +Q+ D+   A+ AE AGIDLRI+ LTR
Sbjct:  304 KKVVSSNVRFVFFAGLEGTGHHFWQELLRRLSISHSADLSQ--ELFNRQHGSLFSSTDERGREDLAEHVVELMSETQKNLSSVPGCNVVALNVGGTT-YPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTR 442          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 4.740e-8
Identity = 48/150 (32.00%), Postives = 70/150 (46.67%), Query Frame = 0
Query:   79 VLKKQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPK---NEDDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTRAA 225
            +L K   S   RL+F+ GLEGTGHHY+     ++     +  P      + +Y   A  K   N   +  +    +  M++LA    +L         F S P       SYP   G  K +Q++DL + AE AE AGID R++YL R+A
Sbjct:  138 ILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDN-MNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANL--SSPGALEFFSIP------CSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSA 278          
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO)

HSP 1 Score: 60.5 bits (145), Expect = 3.690e-7
Identity = 49/170 (28.82%), Postives = 75/170 (44.12%), Query Frame = 0
Query:   79 VLKKQAFSSAIRLIFLVGLEGTGHHYMSGVLTNMCRTGKVPCP--------------NLCPLAEVMYPTLANPKNE---------DDYKNARRKLLREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHVDLKLFAEEAERAGIDLRIIYLTRAA 225
            +L K+   +  RL+F+ GLEG+GHH    +L    +  +                   L      +Y   A  K E           ++ A  ++   +++L+ +    P+    +AS G C     GMMSYPN+ GK K  Q  D++L AE AE  G+D RI+ L R A
Sbjct:   98 LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPL----LASLGGC-----GMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPA 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102188.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FMV4_ECTSI6.760e-4553.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMV3_ECTSI2.310e-4449.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KIA1_9PHAE2.530e-3049.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3W283_9SPIT2.960e-1034.23Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A812KSC5_9DINO4.540e-1034.46Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812H6X7_9DINO1.190e-931.54Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A813BJ34_SYMMI3.190e-930.28Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A1Q9EVB9_SYMMI4.950e-930.28Uncharacterized protein n=2 Tax=Symbiodinium micro... [more]
A0A6H5JH94_9PHAE4.740e-832.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0A0K6_9DINO3.690e-728.82Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102188contigH-elongata_contig102188:1054..1728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102188.197.1mRNA_H-elongata_contig102188.197.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102188 687..1728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102188.197.1 ID=prot_H-elongata_contig102188.197.1|Name=mRNA_H-elongata_contig102188.197.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp
MRSSTYRRIVAIILLVVSALVSYIFLHPLLVMHGPRSTQQKKTRQKVDGE
SATVVKIEPTTPPTQEPFPAFEPFYEDGVLKKQAFSSAIRLIFLVGLEGT
GHHYMSGVLTNMCRTGKVPCPNLCPLAEVMYPTLANPKNEDDYKNARRKL
LREMQKLAMQVKDLPVGKASIASFGSCPGIKNGMMSYPNYDGKYKALQHV
DLKLFAEEAERAGIDLRIIYLTRAA
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