prot_H-elongata_contig101943.173.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig101943.173.1 vs. uniprot
Match: A0A3S4Q8K1_9ACAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S4Q8K1_9ACAR) HSP 1 Score: 55.5 bits (132), Expect = 1.300e-6 Identity = 28/85 (32.94%), Postives = 50/85 (58.82%), Query Frame = 0
Query: 24 WVTDSGFSRFMTPSADYMVNYR--EGGGVVRIADGRVMPIEGTGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMDDRGH 106
W+ DSG S ++ +++ +++ E +RIA+ +V+ +EG GN+ + + GK W A + NV +VP G NL S+ D+G+
Sbjct: 10 WIADSGASEHISFHKEWLQDFKPIETKRELRIANNKVINVEGVGNILATVFDGKRWSNATIYNVLYVPESGVNLFSIGAAADKGY 94
BLAST of mRNA_H-elongata_contig101943.173.1 vs. uniprot
Match: A0A2K3JT83_TRIPR (Copia LTR rider (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JT83_TRIPR) HSP 1 Score: 52.0 bits (123), Expect = 1.750e-5 Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 0
Query: 27 DSGFSRFMTPSADY--MVNYREGGGVVRIADGRVMPIEGTGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMDDRGHKYV 109
DSG S M P +Y +++ +EGG VVR+++ + I+GTG + + + +D+ +L NV ++P L NL+S+ M D G+ +
Sbjct: 2 DSGCSYHMCPRKEYFEILDLKEGG-VVRLSNNKACKIQGTGTIRLKMFDDRDF---LLKNVXYIPELKRNLISISMFDGLGYSTI 82
BLAST of mRNA_H-elongata_contig101943.173.1 vs. uniprot
Match: A0A1B6E9D0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6E9D0_9HEMI) HSP 1 Score: 52.0 bits (123), Expect = 2.180e-5 Identity = 26/82 (31.71%), Postives = 47/82 (57.32%), Query Frame = 0
Query: 24 WVTDSGFSRFMTPSADYMVNYREGGGVVRIADGRVMPIEGTGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMDDRG 105
W DSG + M+P + N+R+ ++IA+ ++ EG G++ + + + L NV++VP L NLLS+K++ D+G
Sbjct: 289 WYLDSGATVHMSPHKHLIKNFRQSSKGIKIANKEIIQTEGQGDIEIKVKLKNEVRQIKLKNVSYVPQLAANLLSIKVLTDKG 370 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101943.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig101943.173.1 ID=prot_H-elongata_contig101943.173.1|Name=mRNA_H-elongata_contig101943.173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bpback to top |