prot_H-elongata_contig101831.157.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101831.157.1
Unique Nameprot_H-elongata_contig101831.157.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: D7FR97_ECTSI (Ribosome biogenesis protein NSA2 homolog n=3 Tax=PX clade TaxID=569578 RepID=D7FR97_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 4.990e-72
Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV
Sbjct:  150 VTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: A0A7S2V588_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V588_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.030e-66
Identity = 101/111 (90.99%), Postives = 107/111 (96.40%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KVTFVG+ FTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHL ILGVKKNPSSP+YTQLGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:  150 VTKVTFVGDDFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLQILGVKKNPSSPMYTQLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: A0A7S3ZIB4_9EUKA (Ribosome biogenesis protein NSA2 homolog n=3 Tax=Chlorarachniophyceae TaxID=29197 RepID=A0A7S3ZIB4_9EUKA)

HSP 1 Score: 207 bits (528), Expect = 1.470e-65
Identity = 100/111 (90.09%), Postives = 104/111 (93.69%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            I KVT+VGEGFTRK PKYERFIRPTGLRFKKAHVTHPELK TFHLDI+GVKKNP SPLYT LGV+TKGTVIEVNVSDLGLVT SGKVVWGKYAQVTN+PE DGCINAVLLV
Sbjct:  157 ITKVTYVGEGFTRKPPKYERFIRPTGLRFKKAHVTHPELKCTFHLDIIGVKKNPQSPLYTNLGVITKGTVIEVNVSDLGLVTPSGKVVWGKYAQVTNNPENDGCINAVLLV 267          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: D3B3Z7_POLPP (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3Z7_POLPP)

HSP 1 Score: 207 bits (527), Expect = 1.680e-65
Identity = 98/111 (88.29%), Postives = 107/111 (96.40%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELK+TF+LDILGVKKNP SP YTQLGV+TKGT+IEVNVSDLGLVTQ+GKVVWGK+AQVTN+PE DGCINA+LLV
Sbjct:  150 VTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKSTFYLDILGVKKNPQSPTYTQLGVITKGTIIEVNVSDLGLVTQTGKVVWGKFAQVTNNPENDGCINALLLV 260          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: A0A7S2SRB9_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.680e-65
Identity = 100/111 (90.09%), Postives = 106/111 (95.50%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KV FVGE FTRK PKYERFIRPTGLRFKKAHVTHPEL+ATFHLDI+GVKKNPSS LYTQLGV+TKGTVIEVNVS+LGLVTQSGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:  150 VTKVCFVGENFTRKNPKYERFIRPTGLRFKKAHVTHPELQATFHLDIIGVKKNPSSSLYTQLGVITKGTVIEVNVSELGLVTQSGKVVWGKYAQVTNNPELDGCINAVLLV 260          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: D8M881_BLAHO (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M881_BLAHO)

HSP 1 Score: 202 bits (515), Expect = 1.700e-64
Identity = 95/111 (85.59%), Postives = 105/111 (94.59%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            I KVTFVGEGFTRK PKYERF+RPTGLRFKKAHVTHPELK TF+LDI+GVKKNP S LYT+LGV+TKGT+IEVNVS+LGLVT+SGKVVWGKYAQVTN+PE DGCINA+LLV
Sbjct:   90 ITKVTFVGEGFTRKPPKYERFVRPTGLRFKKAHVTHPELKTTFYLDIIGVKKNPQSKLYTELGVITKGTIIEVNVSELGLVTESGKVVWGKYAQVTNNPENDGCINAILLV 200          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: A0A7S2DND8_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND8_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.620e-64
Identity = 99/111 (89.19%), Postives = 105/111 (94.59%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KVTFVG  FTRK PKYERFIRP+GLRFKKAHVTHPEL+ATFHLD+LGVKKNPSS LYTQLGV+TKGTVIEVNVSDLGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:  160 VTKVTFVGPNFTRKNPKYERFIRPSGLRFKKAHVTHPELQATFHLDLLGVKKNPSSNLYTQLGVITKGTVIEVNVSDLGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 270          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: A0A7S2AAY7_9EUKA (Hypothetical protein n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2AAY7_9EUKA)

HSP 1 Score: 202 bits (514), Expect = 3.220e-64
Identity = 95/109 (87.16%), Postives = 103/109 (94.50%), Query Frame = 0
Query:    3 KVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            KVTFVGEGFTRK PKYERFIRP+ LRFKKAHVTHPELK TFHLDI+GVKKNPSSPLYT LGV+TKGT++EVNVSDLGLVT +GK+VWGKYAQVTN+PE DGCINAVLLV
Sbjct:  101 KVTFVGEGFTRKPPKYERFIRPSALRFKKAHVTHPELKTTFHLDIIGVKKNPSSPLYTSLGVVTKGTILEVNVSDLGLVTPTGKIVWGKYAQVTNNPENDGCINAVLLV 209          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: W7THK2_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THK2_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.520e-64
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KVTFVGE FTRKAPK+ERFIRPTGLRFKKAHVTHP+L+ATF LDILGVKKNPSSP+YT LGV+TKGTVIEVNVS+LGLVT SGKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:  150 VTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260          
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Match: A0A7L1XHK7_9AVES (Ribosome biogenesis protein NSA2 homolog (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L1XHK7_9AVES)

HSP 1 Score: 200 bits (509), Expect = 1.260e-63
Identity = 97/111 (87.39%), Postives = 103/111 (92.79%), Query Frame = 0
Query:    1 IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 111
            + KV FVG+GFTRK PKYERFIRP GLRFKKAHVTHPELKATF L ILGVKKNPSSPLYTQLGV+TKGTVIEVNVS+LGLVTQ GKV+WGKYAQVTN+PE DGCINAVLLV
Sbjct:   87 VTKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTQLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101831.157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR97_ECTSI4.990e-7298.20Ribosome biogenesis protein NSA2 homolog n=3 Tax=P... [more]
A0A7S2V588_9STRA1.030e-6690.99Ribosome biogenesis protein NSA2 homolog n=1 Tax=F... [more]
A0A7S3ZIB4_9EUKA1.470e-6590.09Ribosome biogenesis protein NSA2 homolog n=3 Tax=C... [more]
D3B3Z7_POLPP1.680e-6588.29Ribosome biogenesis protein NSA2 homolog n=1 Tax=P... [more]
A0A7S2SRB9_9STRA1.680e-6590.09Ribosome biogenesis protein NSA2 homolog n=1 Tax=R... [more]
D8M881_BLAHO1.700e-6485.59Ribosome biogenesis protein NSA2 homolog n=1 Tax=B... [more]
A0A7S2DND8_9STRA2.620e-6489.19Ribosome biogenesis protein NSA2 homolog n=2 Tax=D... [more]
A0A7S2AAY7_9EUKA3.220e-6487.16Hypothetical protein n=1 Tax=Stereomyxa ramosa Tax... [more]
W7THK2_9STRA5.520e-6488.29Ribosome biogenesis protein NSA2 homolog n=2 Tax=M... [more]
A0A7L1XHK7_9AVES1.260e-6387.39Ribosome biogenesis protein NSA2 homolog (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.10.310coord: 30..111
e-value: 1.0E-11
score: 46.3
NoneNo IPR availablePANTHERPTHR12642:SF0RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOGcoord: 1..111
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 18..110
e-value: 7.2E-37
score: 126.6
IPR039411Ribosomal biogenesis NSA2 familyPANTHERPTHR12642FAMILY NOT NAMEDcoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101831contigH-elongata_contig101831:681..1723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101831.157.1mRNA_H-elongata_contig101831.157.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101831 681..1723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101831.157.1 ID=prot_H-elongata_contig101831.157.1|Name=mRNA_H-elongata_contig101831.157.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
IVKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGV
KKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPE
LDGCINAVLLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR039411NSA2_fam