prot_H-elongata_contig10181.155.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10181.155.1
Unique Nameprot_H-elongata_contig10181.155.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.930e-21
Identity = 57/133 (42.86%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 MENNNEGCLYDGGDCCVCTRIDDGPSPYSDISSAFLFCVDPSASCYDREAVALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECT---LSTNGSTS--FSSGGSSPLALSDDSSRISFCVNPSDPCYN 128
             ENNNE C YDGGDCC CT ++     YS   +A   C+DPSA C D + V +      G +  +G+G CD++NNNEGC YD GDCCECT   L T+  T   F +G  +  A          C++P+ PC N
Sbjct:   68 QENNNEICGYDGGDCCECTCVNAWDDDYS--CAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFA----------CIDPNAPCVN 188          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.720e-17
Identity = 54/129 (41.86%), Postives = 70/129 (54.26%), Query Frame = 0
Query:    1 MENNNEGCLYDGGDCCVCTRIDDGPSPYSDISSAFLFCVDPSASCYDREAVALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECTLSTNGSTSFSSGGSSPLALSDDSSRISF-CVNPSDPCYN 128
            M+NNNE C YDGGDCC CT  +D P+      S+F  C+DP+A C D ++  +           IG+G CD DNNNE C YD GDCCECT  +             L   D + R +F CV+P+ PC +
Sbjct:  226 MDNNNEACAYDGGDCCECT-CEDTPNNRCGRWSSFA-CIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCES-------------LEDDDWACRNNFACVDPNAPCVD 339          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.980e-17
Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 0
Query:    3 NNNEGCLYDGGDCCVCTRIDDGPSPYSDISSAFLFCVDPSASCYDREAVALQS--TCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECTLSTNGSTSFSSGGSSPLALSDDSSRISFCVNPSDPCYN 128
            NNNE C YDGGDCC CT + D  + +     A   C+DP+A C D + V   +   C+   IE +GDG CD  NNNE C YD GDCCECT  ++         S+ + +  D S    C++P+  C++
Sbjct:  220 NNNEQCGYDGGDCCECTCVVDWSAEFGCTEFA---CIDPTAPCVDDDDVTADALENCM---IEYLGDGYCDTYNNNEICDYDGGDCCECTCGSD---------STDVLVGSDCSDF-VCIDPTASCFD 331          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: D7FSR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.130e-15
Identity = 49/128 (38.28%), Postives = 64/128 (50.00%), Query Frame = 0
Query:    3 NNNEGCLYDGGDCCVCTRIDDGPSPYSDISSAFLFCVDPSASCYDREAVALQS--TCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECTLSTNGSTSFSSGGSSPLALSDDSSRISFCVNPSDPCYN 128
            NNNE C YDGGDCC CT + D  + +     A   C+DP+A C D + V   +   C+   +E +GDG CD  NN E C YD GDCCECT           G  S   L         C++P+  C++
Sbjct:   71 NNNEQCGYDGGDCCECTCVVDWSAEFGCTEFA---CIDPTAPCVDDDDVTADALENCM---MEYLGDGYCDTYNNIEICDYDGGDCCECTC----------GSDSTDVLDXXXXXXXXCIDPTASCFD 182          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: A0A6H5JTB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB5_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.110e-9
Identity = 46/140 (32.86%), Postives = 61/140 (43.57%), Query Frame = 0
Query:    2 ENNNEGCLYDGGDCCVCTRID----------DGPSPYSDISSAFLFCVDPSASCYDREAVALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECTLSTNGSTSFSSGGSSPLALSDDSSRISF-CVNPSDPCYNLE 130
            +NN E C +DGGDCCV + +D          D   P S   +  L C+DP              TC    +EDIG+GRCD + NNE C +D GDCC                 +P  L +      + C +P+ P Y LE
Sbjct:  180 DNNVEECSFDGGDCCVDSCVDAKYTCGVTYRDQCDPQSSDCNLRLICLDPVYKTPAPTPTLFNRTCP---VEDIGNGRCDDEYNNEFCLFDGGDCC-----------------APSCLGESCGAYEYDCKDPNTPEYGLE 299          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 9.930e-9
Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 0
Query:    1 MENNNEGCLYDGGDCCVCTRIDDGPSPYSDISSAFLFCVDPSASCYDREAVALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECT 90
            + NN+  C YDGGDCC C+ ID GP  Y   S  F  C+DP   C +    A ++T  +     + DG CD  NN   C YD GDCCEC+
Sbjct:   99 LVNNHPSCDYDGGDCCECSCID-GPD-YGCGSIGFA-CLDPD--CGNTTETAPENTTCEESW--MNDGYCDSSNNYPSCDYDGGDCCECS 181          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: D7G6M7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M7_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.170e-8
Identity = 32/79 (40.51%), Postives = 39/79 (49.37%), Query Frame = 0
Query:    3 NNNEGCLYDGGDCCVCTRIDDGPSPYSD--ISSAFLFCVDPSASCYDREAVALQSTCIDGDIEDIGDGRCDKDNNNEGC 79
            NNN  C YDGGDCC CT        Y        ++ C+DP ASC D + V ++          IGDG C+K NNN  C
Sbjct:   45 NNNAECGYDGGDCCECTCQTQSDDDYYSGRCDKEYMACIDPDASCVDDDDVTIELVANCSHAGAIGDGICEKGNNNPEC 123          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: D7G300_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G300_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 2.290e-6
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0
Query:   50 AVALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECT 90
            A A   +C++G I+DIG+GRCD +NN+  C +D GDCC CT
Sbjct:   21 AAAQYDSCVNGTIDDIGNGRCDAENNSPSCGFDGGDCCSCT 61          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.920e-6
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 0
Query:   38 CVDPSASCYDREAVALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECT 90
            C+DP A+C D + + +           +GDG CDK NNNE C YD GDCCECT
Sbjct:  434 CIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECT 486          
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Match: A0A2E8RY24_9DELT (SMB domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E8RY24_9DELT)

HSP 1 Score: 53.5 bits (127), Expect = 5.910e-5
Identity = 43/125 (34.40%), Postives = 48/125 (38.40%), Query Frame = 0
Query:    3 NNNEGCLYDGGDCCVCTR--IDDGPSPYSDISSAFLFCVDPSA---------SCYDREAVALQ----------STCIDGDIED----------------IGDGRCDKDNNNEGCQYDDGDCCECT 90
            NNNEGC +DGGDCC+ T    DD      D       C DP A         S  + +   LQ           TC  G   D                IGDG CD  NNN  C +D GDCC  T
Sbjct:  410 NNNEGCAWDGGDCCLSTNPVCDDNLFSVCD-------CQDPDACENNPANCGSTCEPDCTGLQCGDDGCGGSCGTCDAGQSXDSGVCVSGGTCGGNEIWIGDGYCDNGNNNLECSWDGGDCCPST 527          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10181.155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G0S4_ECTSI2.930e-2142.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE3.720e-1741.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK5_9PHAE6.980e-1739.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSR3_ECTSI1.130e-1538.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTB5_9PHAE1.110e-932.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI9.930e-943.33Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G6M7_ECTSI2.170e-840.51LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G300_ECTSI2.290e-653.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR2_9PHAE3.920e-649.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2E8RY24_9DELT5.910e-534.40SMB domain-containing protein n=1 Tax=Myxococcales... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10181contigH-elongata_contig10181:1073..1907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10181.155.1mRNA_H-elongata_contig10181.155.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10181 1073..1907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10181.155.1 ID=prot_H-elongata_contig10181.155.1|Name=mRNA_H-elongata_contig10181.155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
MENNNEGCLYDGGDCCVCTRIDDGPSPYSDISSAFLFCVDPSASCYDREA
VALQSTCIDGDIEDIGDGRCDKDNNNEGCQYDDGDCCECTLSTNGSTSFS
SGGSSPLALSDDSSRISFCVNPSDPCYNLETLETVSAMKKTTTTGVTTTR
VTAAPAHASLETILVVVTGFLAWTQTLPAWNHISAWNHRPITR
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