prot_H-elongata_contig101762.152.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101762.152.1
Unique Nameprot_H-elongata_contig101762.152.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
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BLAST of mRNA_H-elongata_contig101762.152.1 vs. uniprot
Match: A0A6H5JV39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV39_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.110e-7
Identity = 32/55 (58.18%), Postives = 44/55 (80.00%), Query Frame = 0 
Query:   44 DARSAELRKEYGHETLRNARETAKEALSALLLERKTIVSSVAEAKRKLAVTYPSM 98
            DARS ELR+ YG + LR ARE AKEA SAL+ E++ +++SVAEA++ L+ TYPS+
Sbjct:   63 DARSGELRERYGADILRGAREAAKEAHSALVREKRCLLASVAEAEKMLSSTYPSL 117
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BLAST of mRNA_H-elongata_contig101762.152.1 vs. uniprot
Match: D7FRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP3_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 6.950e-6
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:   44 DARSAELRKEYGHETLRNARETAKEALSALLLERKTIVSSVAEAKRKLAVTYP 96
            DARS ELR+ YG +TLR ARE AKEA S L+ E++ +++SVAEA++ L+  YP
Sbjct: 1051 DARSGELRERYGADTLRGAREAAKEAHSVLVREKRRLLASVAEAEKMLSSAYP 1103
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101762.152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV39_9PHAE5.110e-758.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRP3_ECTSI6.950e-656.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..51
NoneNo IPR availableCOILSCoilCoilcoord: 56..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101762contigH-elongata_contig101762:1071..2091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101762.152.1mRNA_H-elongata_contig101762.152.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101762 1069..2091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101762.152.1 ID=prot_H-elongata_contig101762.152.1|Name=mRNA_H-elongata_contig101762.152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
EAARARVERAHQQQRRLETRKARLSALEVEIAEAKSEVDSACADARSAEL
RKEYGHETLRNARETAKEALSALLLERKTIVSSVAEAKRKLAVTYPSMAA
AAARKLTAEEERATRASEVQQVVSSRTTAPAAPATVDATAPFDVNGEIDE
TIAGVGEPGAKAIVKAALARAAGADGGAGKGKAESNEQH
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