prot_H-elongata_contig10174.148.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10174.148.1
Unique Nameprot_H-elongata_contig10174.148.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length317
Homology
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A6H5JMA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA6_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 5.490e-88
Identity = 139/187 (74.33%), Postives = 160/187 (85.56%), Query Frame = 0
Query:    1 MRHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHG-REPPAEHEKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMELPRVETNLLGADETVIADICDVILSLYGERGPGY 186
            M HSF KHER F+GSACLFLA+KVEE+ KRVE VMSK + VW+G R+PP+E+EK+FKRLREKILIAERCVLHTLGFQLTV HPY+ VM LLKKLF  G+GA  G G +KALNRQL+QA T FVNDSLLTT+CLQY P +VAAAVVYLSYL+M LPRV+T LL AD TV+A+ICD+ILSLY ERG G+
Sbjct:   80 MLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGLPRVDTTLLEADVTVVANICDIILSLYDERGAGH 266          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: D8LLM1_ECTSI (Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM1_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.140e-80
Identity = 128/170 (75.29%), Postives = 145/170 (85.29%), Query Frame = 0
Query:    1 MRHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHG-REPPAEHEKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMELPRVETNLLGADETVIA 169
            M HSF KHER F+GSACLFLA+KVEE+ KRVE VMSK + VW+G R+PPAE+EK+FKRLREKILIAERCVLHTLGFQLTV HPY+ VM LLKKLF  G+GA  G G +KALNRQL+QA T FVNDSLLTT+CLQY P +VAAAVVYLSYL+M LPRV+T LL AD TV+A
Sbjct:   67 MLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPAENEKSFKRLREKILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGGKGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGLPRVDTMLLEADVTVVA 236          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A7S4F3M7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3M7_CHRCT)

HSP 1 Score: 122 bits (306), Expect = 2.720e-28
Identity = 76/207 (36.71%), Postives = 107/207 (51.69%), Query Frame = 0
Query:    3 HSFLKHE------RMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPAEHEKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFM--------ELPRVET----NLLGADETVIADICDVILSLYGERGPGYPVTDN 191
            H F  H+      R  I + CLFLASKVEE PK+++ V+ + Y + HGR+ P    + FK L+E+IL++ER +L TLGF LTV H Y  ++  +K +  QG              R L Q    F+NDSL TT+CLQY P  V+AA VYL+  ++        ELP  +     +     E    D+ + I+ LY  +  G P   N
Sbjct:   99 HRFFAHKSYENYCRFTIATTCLFLASKVEETPKKLKDVVIETYRIQHGRQAPDPESQEFKDLKERILVSERVLLQTLGFDLTVEHAYRPLLAYVKSI--QG-------------TRDLAQVAWNFINDSLRTTICLQYAPRHVSAAAVYLAARYLSEHHDKLYELPPHQGGKWYDAFHVSEEAFQDVANQIMELYDSKANGGPALAN 290          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A6V1NFC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NFC1_HETAK)

HSP 1 Score: 118 bits (296), Expect = 9.360e-28
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 0
Query:    2 RHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPAEHEKTFKRL-REKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMELPRVETNL------------LGADETV----IADICDVILSLY 179
            R SF +H+R  + +ACL LA KVEE+PK++EVV + C+AV H      E E    ++ +EKIL  ER +LHT+GF + + HPY  ++E+ KKL  + +G   GN  + A  RQ  Q    FVNDS  T++CL++ P  VAA  V+L+ LF  L R E  L             G D+      + DIC  ++ LY
Sbjct:   67 RQSFKQHDRFDVAAACLHLAGKVEESPKKLEVVAATCHAVRHRGAKTLEKESEESKIAKEKILTCERILLHTMGFDMCIEHPYKYLIEVCKKL--KNKGIIGGN-QDDAGGRQFAQTALNFVNDSFRTSLCLRHPPPLVAAGAVFLAALFAGL-RPEGRLGAGWLRLLAPVESGFDQLAFEHKLYDICRQVMELY 257          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A7S2B1V0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1V0_9STRA)

HSP 1 Score: 117 bits (293), Expect = 8.350e-27
Identity = 63/183 (34.43%), Postives = 105/183 (57.38%), Query Frame = 0
Query:    4 SFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPAEH--EKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMELPRVETN-----LLGADETVIADICDVILSLY 179
            SF K  R  I   CLFLA KVEE P+++E V+  C+ +W+  + P  +   + ++ LR  IL  ER +LHT+ F L V+HPY  +++ +KKL   G        + +   R+  Q+   F+NDS+ T++CLQ+ P ++A+A +YL+ ++M + + E N      L  +   +A IC+ I+ +Y
Sbjct:   66 SFKKFRRFDIAVTCLFLAGKVEEYPRKLESVIQMCHQIWNKLDKPTLNPDSQDYEFLRLTILRTERQILHTIAFDLCVKHPYKDLIDTVKKLHQAGL-------IEEKQKREFAQSALNFLNDSMRTSICLQFEPKKIASATIYLATVYMNMNKPEENPDWMKKLEINHQELASICEQIMEVY 241          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A1Z5JU78_FISSO (Cyclin T n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU78_FISSO)

HSP 1 Score: 112 bits (279), Expect = 3.800e-25
Identity = 72/217 (33.18%), Postives = 115/217 (53.00%), Query Frame = 0
Query:    2 RHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAV-WHGRE-------PPAEHEK--TFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGR-----------GAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMEL-PRVETN-----LLGADETVIADICDVILSLYGERGPGYPVTDN 191
            +HSF +H+R  +  ACL LA+K EE+PK++ VV+ +C  + W G +       PP    K   F +L+E++L+ ER +LHT+GF+L++ HPY  ++E +K+L  QG+           G  S     + +  ++ Q    F NDS+ T++CLQ+ P ++A   VYL+  F  L P  E++     LL  D   +  I   ++ L  ER    P   N
Sbjct:   61 KHSFAQHDRFEVAVACLLLAAKTEESPKKLVVVLEECQKLKWRGMQAGSASVKPPDLDPKGEEFSKLKERVLLLERVILHTIGFELSIDHPYKFLVEQIKQL-VQGKKLIYQNNHTPVGLSSPQQQQQHMMNEMVQLAMNFANDSMHTSLCLQFDPKKIALTCVYLAAQFGHLMPANESDDWCDSLLSIDPASLVSIALQLIELIAERKGSDPTVLN 276          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A1E7FTI4_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTI4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.020e-24
Identity = 58/151 (38.41%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    2 RHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPAEHEK--TFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLF 150
            +H+F +H+R  +  A L LA+K EE PK++  V+ +CY +   R   A H K   F +L+E+IL+ ER +LHT+GF+L++ HPY   ++++KKL            ++K +N +L Q +    NDS  T++CLQ+ P E+A A VYL+ +F
Sbjct:   50 KHAFQEHDRFEVAVAALVLAAKTEEAPKKLNTVIQECYKL-KARAMQAGHTKGEDFLKLKERILLLERIILHTIGFELSIDHPYKFFVDMIKKLII----------MSKMMN-ELVQYSMSTANDSYQTSLCLQFGPKEIATACVYLACMF 188          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: C1FEH1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEH1_MICCC)

HSP 1 Score: 106 bits (265), Expect = 1.520e-23
Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 0
Query:    3 HSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGRE-----PPAEHEKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMELPRVETNLL----GADETVIADICDVILSLYGERGPGY 186
            H   +++R  + +ACLFLA+KVEE PK ++ V+   Y V H  E          ++ F+  REK+L AER +LHT+GF   V HPY  ++ + ++L       G      +  +R+  Q    F NDSL TT+CLQ+   ++A A V LS+  ++  +     L     + + +  +IC+ I+ LY E    +
Sbjct:   65 HGIKENDRFIVATACLFLAAKVEETPKPLKEVVRVAYLVQHKNEYDDAVKRIHQKERFEEHREKVLQAERLILHTVGFDFNVEHPYKHILNIAREL-------GQREEQLEIHHRRATQVAWNFANDSLRTTLCLQFCSHDIARAAVNLSFNILQATQRNPQKLLDERASKDAICEEICNQIMDLYDETNASF 250          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A7S3BI51_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BI51_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 2.460e-23
Identity = 74/198 (37.37%), Postives = 103/198 (52.02%), Query Frame = 0
Query:    2 RHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPAEHE-KTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFME--------LPRVET-----NLLGADETVIADICDVILSLYGERGPG 185
            R S+  ++R  + + CLFLASKVEE PK+++ V+S+ Y V H ++   E E K F  L+EKIL+ ER +L  L F L+V H Y  ++  +K +    +G            R L Q    F+NDSL TTVCLQY P  +AAA   L+  +++        LP         +   A E VIADI   IL +Y    PG
Sbjct:  102 RESYEHYDRFIVATTCLFLASKVEETPKKLKDVVSETYKVHHSKDRGPEPESKEFFELKEKILVCERILLQALAFDLSVEHAYRPLLAYVKSI----KGT-----------RDLAQIAWNFINDSLRTTVCLQYAPRCLAAAAADLAAKYIKTDSGKGFALPDTPQGQKWYHAFQATEEVIADISSQILEMYESNKPG 284          
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Match: A0A7C8Z525_OPUST (Uncharacterized protein (Fragment) n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A7C8Z525_OPUST)

HSP 1 Score: 102 bits (255), Expect = 9.450e-23
Identity = 56/157 (35.67%), Postives = 90/157 (57.32%), Query Frame = 0
Query:    1 MRHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPA----EHEKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGAGSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLFMEL 153
            +R S  K++R  I +AC+FLA KVEE P+ ++ V+   Y + H ++P A    + ++ +++ +E IL+ ER VL TLGF L V+HPY  ++E +KK               K     L Q    FVND L T++CLQ+ P  +AA  ++L+  F+++
Sbjct:   17 LRQSHAKNDRRTIATACMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQKIKQKEVYEQQKELILLGERVVLATLGFDLNVQHPYKPLVEAIKKF--------------KVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKV 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10174.148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMA6_9PHAE5.490e-8874.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLM1_ECTSI1.140e-8075.29Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7S4F3M7_CHRCT2.720e-2836.71Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A6V1NFC1_HETAK9.360e-2839.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2B1V0_9STRA8.350e-2734.43Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A1Z5JU78_FISSO3.800e-2533.18Cyclin T n=2 Tax=Fistulifera solaris TaxID=1519565... [more]
A0A1E7FTI4_9STRA6.020e-2438.41Cyclin-like protein (Fragment) n=1 Tax=Fragilariop... [more]
C1FEH1_MICCC1.520e-2332.12Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A7S3BI51_9EUKA2.460e-2337.37Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7C8Z525_OPUST9.450e-2335.67Uncharacterized protein (Fragment) n=3 Tax=Pentape... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..78
e-value: 2.4E-19
score: 71.5
NoneNo IPR availableGENE3D1.10.472.10coord: 79..184
e-value: 6.0E-14
score: 54.1
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 1..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..316
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 3..77
e-value: 2.7E-6
score: 27.1
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 80..179
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10174contigH-elongata_contig10174:2232..4957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10174.148.1mRNA_H-elongata_contig10174.148.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10174 880..5006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10174.148.1 ID=prot_H-elongata_contig10174.148.1|Name=mRNA_H-elongata_contig10174.148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp
MRHSFLKHERMFIGSACLFLASKVEENPKRVEVVMSKCYAVWHGREPPAE
HEKTFKRLREKILIAERCVLHTLGFQLTVRHPYTAVMELLKKLFAQGRGA
GSGNGVNKALNRQLNQATTCFVNDSLLTTVCLQYHPAEVAAAVVYLSYLF
MELPRVETNLLGADETVIADICDVILSLYGERGPGYPVTDNDAACTPTTA
SVSPATPPSPSQKPPAETGAASPRVSDGNAGGSSEAAKRERRSYSGGGGS
SRRSGAFGGLASRSADEETRSRNPGPSTPASAGKSPRPIGQGGKGAVLFG
GGEEKGVTRVTKRQKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf