prot_H-elongata_contig101341.120.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101341.120.1
Unique Nameprot_H-elongata_contig101341.120.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Match: A0A6H5JS20_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 8.000e-27
Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
Query:    1 MAQSVSVLDGEVNRNWYLVDSQGQKHLLTLFHDCVTGARAAMLDYE---EVPGSAGTTNLFN 59
            MAQ VS+LDGEVNRNW+LVDS G+KHLLTLFHDC+TGARAAMLDYE   EVPGSAGTTNLFN
Sbjct:    1 MAQQVSILDGEVNRNWHLVDSGGEKHLLTLFHDCMTGARAAMLDYEAKEEVPGSAGTTNLFN 62          
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Match: A0A7S2DHE0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHE0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.620e-15
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    3 QSVSVLDGEVNRNWYLVDSQGQKHLLTLFHDCVTGARAAMLDYEEVPGSAGTTNLFN 59
            Q VSVL GEVNR+W   D  G+ H ++L+H  VTGARAAMLDYEE+PGS GT+++F+
Sbjct:   10 QMVSVLSGEVNRSWLFPDQDGRVHEVSLYHHTVTGARAAMLDYEELPGSLGTSSMFH 66          
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Match: A0A835YSM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 7.840e-14
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    6 SVLDGEVNRNWYLVDSQGQKHLLTLFHDCVTGARAAMLDYEEVPGSAGTTNLFN 59
            SV  GE+NR+W  +DS G +H+L+L HDCV+GARA +LDY E+  SAGT+N  N
Sbjct:   90 SVFSGEINRHWEFLDSAGGRHVLSLIHDCVSGARACLLDYAELKDSAGTSNCLN 143          
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Match: A0A7S2UVB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.620e-12
Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    5 VSVLDGEVNRNWYLVDSQG--QKHLLTLFHDCVTGARAAMLDYEEVPGSAGTTNLF 58
            VS+  GE+NR W  VD +G  ++H++TL+HD +TG R AM+DYEE+ GS GT+++ 
Sbjct:    2 VSLWSGELNRTWRFVDPEGGDKEHVVTLYHDTITGVRCAMMDYEEIQGSMGTSSVL 57          
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Match: F0YDA6_AURAN (PX domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA6_AURAN)

HSP 1 Score: 65.9 bits (159), Expect = 4.090e-11
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    5 VSVLDGEVNRNWYLVDSQGQKHLLTLFHDCVTGARAAMLDYEEVPGSAGTTNLFN 59
            VS+  GEVNR W   D  GQ H ++L+H  +TGARAA++D+EE+ GS GT+++F+
Sbjct:    2 VSIFSGEVNRTWRFCDGGGQHHEVSLYHHPLTGARAALVDHEELEGSLGTSSVFH 56          
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Match: A0A7S3NJE9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJE9_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.700e-10
Identity = 28/55 (50.91%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    5 VSVLDGEVNRNWYLVDSQGQKHLLTLFHDCVTGARAAMLDYEEVPGSAGTTNLFN 59
            VS+  GEV R+W   D +G KH ++L+H  +TGARAAM+D+EE+ GS GT+++F+
Sbjct:    3 VSIFAGEVCRSWKFEDREGIKHEVSLWHHPLTGARAAMVDHEELEGSLGTSSVFH 57          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101341.120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JS20_9PHAE8.000e-2785.48PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S2DHE0_9STRA1.620e-1561.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YSM5_9STRA7.840e-1457.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UVB3_9STRA1.620e-1250.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0YDA6_AURAN4.090e-1150.91PX domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A7S3NJE9_9STRA6.700e-1050.91Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101341contigH-elongata_contig101341:876..1736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101341.120.1mRNA_H-elongata_contig101341.120.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101341 876..1736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101341.120.1 ID=prot_H-elongata_contig101341.120.1|Name=mRNA_H-elongata_contig101341.120.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MAQSVSVLDGEVNRNWYLVDSQGQKHLLTLFHDCVTGARAAMLDYEEVPG
SAGTTNLFN
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