prot_H-elongata_contig10133.118.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig10133.118.1
Unique Name	prot_H-elongata_contig10133.118.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	57

Homology

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BLAST of mRNA_H-elongata_contig10133.118.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 7.550e-17
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0

Query:    1 MEFERALFRVYDRSMEGFQTPTARNTCNLAQQLLLVVSAGLVACLVLLHRDFVNNPG 57
            ME+ERALFRVYD+SMEGF +   R+ CNL Q+L LV SAGL A LVLLH  FVN PG
Sbjct:    1 MEYERALFRVYDKSMEGFHSREVRSACNLLQKLFLVASAGLFAALVLLHHQFVNKPG 57

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BLAST of mRNA_H-elongata_contig10133.118.1 vs. uniprot
Match: D8LRC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 8.700e-17
Identity = 38/57 (66.67%), Postives = 44/57 (77.19%), Query Frame = 0

Query:    1 MEFERALFRVYDRSMEGFQTPTARNTCNLAQQLLLVVSAGLVACLVLLHRDFVNNPG 57
            ME+ERALFRVYD+SMEGF +   R+ CNL Q+L+LV SAGL A L LLH  FVN PG
Sbjct:    1 MEYERALFRVYDKSMEGFHSRGVRSACNLLQKLVLVASAGLFAALFLLHHQFVNKPG 57

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BLAST of mRNA_H-elongata_contig10133.118.1 vs. uniprot
Match: A0A482SLQ4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLQ4_9ARCH)

HSP 1 Score: 50.4 bits (119), Expect = 1.430e-6
Identity = 24/66 (36.36%), Postives = 38/66 (57.58%), Query Frame = 0

Query:    1 MEFERALFRVYDRSMEGFQT---------PTARNTCNLAQQLLLVVSAGLVACLVLLHRDFVNNPG 57
            MEFERAL+RVY+RS+E             P  + +C L Q  +L+++  L++C + LH  +V + G
Sbjct:    1 MEFERALYRVYERSIESIMQEEDPSLQSEPIYKKSCKLFQYFILLITLFLLSCFIFLHTTYVGSAG 66

[Close]

BLAST of mRNA_H-elongata_contig10133.118.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 52.4 bits (124), Expect = 2.110e-6
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0

Query:    1 MEFERALFRVYDRSMEGFQTPT-----ARNTCNL--AQQLLLVVSAGLVACLVLLHRDFVNNPG 57
            MEFERALFRVYDRS+E  Q  +     AR +  L  +Q++L++V+ G++     LH  FV  PG
Sbjct:    1 MEFERALFRVYDRSLESIQLDSPWFGNARPSVILKWSQKILMIVALGMIVLTATLHTTFVEQPG 64

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig10133.118.1 vs. uniprot

BLAST of mRNA_H-elongata_contig10133.118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5JH19_9PHAE	7.550e-17	68.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LRC9_ECTSI	8.700e-17	66.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A482SLQ4_9ARCH	1.430e-6	36.36	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A7S4DCY7_HETAK	2.110e-6	45.31	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..48
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..57
None	No IPR available	TMHMM	TMhelix		coord: 33..50

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig10133	contig	H-elongata_contig10133:79..249 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig10133.118.1	mRNA_H-elongata_contig10133.118.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig10133 79..249 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig10133.118.1 ID=prot_H-elongata_contig10133.118.1|Name=mRNA_H-elongata_contig10133.118.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MEFERALFRVYDRSMEGFQTPTARNTCNLAQQLLLVVSAGLVACLVLLHR
DFVNNPG